Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DDX43P1-201ENST00000510713 1763 ntBASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RSPO3Q9BXY4 TPTE2P2-201ENST00000403471 1466 ntBASIC6.59□□□□□ -1.36
RSPO3Q9BXY4 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.36
RSPO3Q9BXY4 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RSPO3Q9BXY4 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
RSPO3Q9BXY4 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.59□□□□□ -1.36
RSPO3Q9BXY4 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RSPO3Q9BXY4 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.59□□□□□ -1.36
RSPO3Q9BXY4 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RSPO3Q9BXY4 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 RPL12P1-201ENST00000374520 498 ntBASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 SNORA51.7-201ENST00000384171 134 ntBASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 VN1R66P-201ENST00000412929 916 ntBASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 DBIL5P2-201ENST00000443827 253 ntBASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 RN7SL308P-201ENST00000464971 297 ntBASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AC090539.2-201ENST00000523425 671 ntBASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 OR4A21P-201ENST00000532759 944 ntBASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 EGLN3P1-201ENST00000541727 720 ntBASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 EEF1B2P1-201ENST00000567221 672 ntBASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 MIR3135A-201ENST00000578460 77 ntBASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AC010320.5-201ENST00000619124 676 ntBASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AL353898.3-201ENST00000624679 1755 ntBASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RSPO3Q9BXY4 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 U3.48-201ENST00000363172 216 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 RNA5SP472-201ENST00000363868 119 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AC090114.1-201ENST00000393266 448 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 OR7E117P-201ENST00000422682 1112 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 PSMC1P2-201ENST00000423961 1204 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 GAPDHP46-201ENST00000424043 994 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 NPM1P30-201ENST00000425092 828 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 AL591379.2-201ENST00000450223 397 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 SNORA81.1-201ENST00000458922 177 ntBASIC6.57□□□□□ -1.36
RSPO3Q9BXY4 RN7SL797P-201ENST00000486314 297 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms