Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
UBE3AQ05086 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
UBE3AQ05086 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
UBE3AQ05086 IL6-202ENST00000401630 765 ntTSL 5 BASIC7.84□□□□□ -1.15
UBE3AQ05086 SNORA3.1-201ENST00000408166 111 ntBASIC7.84□□□□□ -1.15
UBE3AQ05086 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
UBE3AQ05086 FDPSP1-201ENST00000424976 1071 ntBASIC7.84□□□□□ -1.15
UBE3AQ05086 NPM1P30-201ENST00000425092 828 ntBASIC7.84□□□□□ -1.15
UBE3AQ05086 AC114402.2-201ENST00000432760 643 ntBASIC7.84□□□□□ -1.15
UBE3AQ05086 CLNS1AP1-201ENST00000435954 682 ntBASIC7.84□□□□□ -1.15
UBE3AQ05086 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.84□□□□□ -1.15
UBE3AQ05086 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC7.84□□□□□ -1.15
UBE3AQ05086 OR9A1P-202ENST00000484361 945 ntBASIC7.84□□□□□ -1.15
UBE3AQ05086 AC024451.1-201ENST00000508013 779 ntBASIC7.84□□□□□ -1.15
UBE3AQ05086 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC7.84□□□□□ -1.15
UBE3AQ05086 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.84□□□□□ -1.15
UBE3AQ05086 AP002004.1-206ENST00000532441 876 ntBASIC7.84□□□□□ -1.15
UBE3AQ05086 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.84□□□□□ -1.15
UBE3AQ05086 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
UBE3AQ05086 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC7.84□□□□□ -1.15
UBE3AQ05086 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.84□□□□□ -1.15
UBE3AQ05086 AC138749.2-201ENST00000566048 167 ntBASIC7.84□□□□□ -1.15
UBE3AQ05086 AC005753.1-201ENST00000623837 618 ntBASIC7.84□□□□□ -1.15
UBE3AQ05086 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.84□□□□□ -1.15
UBE3AQ05086 AL590396.3-201ENST00000636334 300 ntBASIC7.84□□□□□ -1.15
UBE3AQ05086 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
UBE3AQ05086 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
UBE3AQ05086 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
UBE3AQ05086 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
UBE3AQ05086 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
UBE3AQ05086 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.84□□□□□ -1.15
UBE3AQ05086 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC7.84□□□□□ -1.15
UBE3AQ05086 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC7.84□□□□□ -1.15
UBE3AQ05086 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
UBE3AQ05086 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
UBE3AQ05086 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
UBE3AQ05086 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.84□□□□□ -1.15
UBE3AQ05086 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.16
UBE3AQ05086 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
UBE3AQ05086 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
UBE3AQ05086 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.84□□□□□ -1.16
UBE3AQ05086 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
UBE3AQ05086 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.84□□□□□ -1.16
UBE3AQ05086 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
UBE3AQ05086 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
UBE3AQ05086 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
UBE3AQ05086 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.83□□□□□ -1.16
UBE3AQ05086 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
UBE3AQ05086 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC7.83□□□□□ -1.16
UBE3AQ05086 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
UBE3AQ05086 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
UBE3AQ05086 SNORA70.8-201ENST00000384231 136 ntBASIC7.83□□□□□ -1.16
UBE3AQ05086 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
UBE3AQ05086 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
UBE3AQ05086 RN7SKP148-201ENST00000410179 275 ntBASIC7.83□□□□□ -1.16
UBE3AQ05086 RPL36P1-201ENST00000419720 225 ntBASIC7.83□□□□□ -1.16
UBE3AQ05086 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.83□□□□□ -1.16
UBE3AQ05086 AC009237.4-201ENST00000441078 238 ntBASIC7.83□□□□□ -1.16
UBE3AQ05086 RN7SL372P-201ENST00000461982 298 ntBASIC7.83□□□□□ -1.16
UBE3AQ05086 AL135933.1-201ENST00000498657 802 ntBASIC7.83□□□□□ -1.16
UBE3AQ05086 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC7.83□□□□□ -1.16
UBE3AQ05086 AP001803.1-201ENST00000525668 147 ntBASIC7.83□□□□□ -1.16
UBE3AQ05086 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.83□□□□□ -1.16
UBE3AQ05086 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC7.83□□□□□ -1.16
UBE3AQ05086 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.83□□□□□ -1.16
UBE3AQ05086 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.83□□□□□ -1.16
UBE3AQ05086 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
UBE3AQ05086 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.83□□□□□ -1.16
UBE3AQ05086 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.83□□□□□ -1.16
UBE3AQ05086 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.83□□□□□ -1.16
UBE3AQ05086 AL512356.3-201ENST00000623005 461 ntBASIC7.83□□□□□ -1.16
UBE3AQ05086 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.83□□□□□ -1.16
UBE3AQ05086 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.83□□□□□ -1.16
UBE3AQ05086 AC026108.1-201ENST00000635444 547 ntBASIC7.83□□□□□ -1.16
UBE3AQ05086 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC7.83□□□□□ -1.16
UBE3AQ05086 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.83□□□□□ -1.16
UBE3AQ05086 CCDC150P1-201ENST00000537123 2215 ntBASIC7.83□□□□□ -1.16
UBE3AQ05086 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC7.83□□□□□ -1.16
UBE3AQ05086 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC7.83□□□□□ -1.16
UBE3AQ05086 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
UBE3AQ05086 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.83□□□□□ -1.16
UBE3AQ05086 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
UBE3AQ05086 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
UBE3AQ05086 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
UBE3AQ05086 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.83□□□□□ -1.16
UBE3AQ05086 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
UBE3AQ05086 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
UBE3AQ05086 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
UBE3AQ05086 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
UBE3AQ05086 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
UBE3AQ05086 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
UBE3AQ05086 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC7.82□□□□□ -1.16
UBE3AQ05086 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
UBE3AQ05086 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.82□□□□□ -1.16
UBE3AQ05086 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
UBE3AQ05086 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
UBE3AQ05086 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
UBE3AQ05086 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC7.82□□□□□ -1.16
UBE3AQ05086 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
UBE3AQ05086 AL672212.1-201ENST00000422246 400 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms