Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MIR128-2-201ENST00000384893 84 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 RNU11-6P-201ENST00000391127 133 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.84□□□□□ -1.31
SUMO3P55854 AC023141.10-201ENST00000415634 200 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.84□□□□□ -1.31
SUMO3P55854 MED15P9-201ENST00000424716 533 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 GAPDHP51-201ENST00000426454 1000 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 RPSAP62-201ENST00000432596 833 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 FTH1P20-201ENST00000434913 548 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 AC244505.2-201ENST00000435089 759 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.84□□□□□ -1.31
SUMO3P55854 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC6.84□□□□□ -1.31
SUMO3P55854 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.84□□□□□ -1.31
SUMO3P55854 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC6.84□□□□□ -1.31
SUMO3P55854 AC096922.1-201ENST00000461635 651 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 AC022730.2-201ENST00000465359 452 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
SUMO3P55854 GAPDHP38-201ENST00000503632 1002 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 AC233724.10-201ENST00000510454 409 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC6.84□□□□□ -1.31
SUMO3P55854 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.84□□□□□ -1.31
SUMO3P55854 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.84□□□□□ -1.31
SUMO3P55854 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.84□□□□□ -1.31
SUMO3P55854 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6.84□□□□□ -1.31
SUMO3P55854 AC133569.1-201ENST00000564327 373 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC6.84□□□□□ -1.31
SUMO3P55854 RN7SL14P-201ENST00000579715 298 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 AC007136.1-201ENST00000589141 199 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 OR5AH1P-201ENST00000595968 283 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SUMO3P55854 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.84□□□□□ -1.31
SUMO3P55854 AL356752.1-201ENST00000615844 593 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SUMO3P55854 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.84□□□□□ -1.31
SUMO3P55854 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.84□□□□□ -1.31
SUMO3P55854 AL355480.4-201ENST00000626823 69 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SUMO3P55854 EPS15P1-202ENST00000459691 2071 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 DDX10P2-201ENST00000417796 2614 ntBASIC6.84□□□□□ -1.31
SUMO3P55854 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SUMO3P55854 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
SUMO3P55854 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC6.84□□□□□ -1.32
SUMO3P55854 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SUMO3P55854 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SUMO3P55854 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SUMO3P55854 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
SUMO3P55854 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.84□□□□□ -1.32
SUMO3P55854 PAXIP1-AS2-201ENST00000397551 1692 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SUMO3P55854 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC6.84□□□□□ -1.32
SUMO3P55854 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SUMO3P55854 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SUMO3P55854 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
SUMO3P55854 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
SUMO3P55854 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SUMO3P55854 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 AC104581.5-201ENST00000624171 7141 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.83□□□□□ -1.32
SUMO3P55854 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 LST1-211ENST00000376110 433 ntTSL 3 BASIC6.83□□□□□ -1.32
SUMO3P55854 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.83□□□□□ -1.32
SUMO3P55854 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC6.83□□□□□ -1.32
SUMO3P55854 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC6.83□□□□□ -1.32
SUMO3P55854 AL357078.2-201ENST00000416486 427 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 MTND2P9-201ENST00000422293 931 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 AC013410.2-201ENST00000422627 201 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 GAPDHP73-201ENST00000423411 1007 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.83□□□□□ -1.32
SUMO3P55854 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.83□□□□□ -1.32
SUMO3P55854 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.83□□□□□ -1.32
SUMO3P55854 ARMC8P1-201ENST00000443069 1289 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 AC234771.3-201ENST00000454984 622 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 AC008799.2-201ENST00000484429 647 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 NPM1P28-201ENST00000492269 840 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 AC097263.1-201ENST00000496795 606 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.83□□□□□ -1.32
SUMO3P55854 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SUMO3P55854 AC134349.2-201ENST00000535136 910 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 AC005000.1-201ENST00000536192 288 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
SUMO3P55854 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.83□□□□□ -1.32
SUMO3P55854 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
SUMO3P55854 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC6.83□□□□□ -1.32
SUMO3P55854 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC6.83□□□□□ -1.32
SUMO3P55854 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.83□□□□□ -1.32
SUMO3P55854 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms