Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
NEK3P51956 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.71□□□□□ -1.18
NEK3P51956 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.7□□□□□ -1.18
NEK3P51956 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.7□□□□□ -1.18
NEK3P51956 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.7□□□□□ -1.18
NEK3P51956 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NEK3P51956 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
NEK3P51956 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
NEK3P51956 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NEK3P51956 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NEK3P51956 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
NEK3P51956 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NEK3P51956 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
NEK3P51956 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NEK3P51956 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NEK3P51956 OR51A10P-201ENST00000307165 937 ntBASIC7.7□□□□□ -1.18
NEK3P51956 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NEK3P51956 BCRP8-201ENST00000412037 255 ntBASIC7.7□□□□□ -1.18
NEK3P51956 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.7□□□□□ -1.18
NEK3P51956 PGAM1P3-201ENST00000420790 565 ntBASIC7.7□□□□□ -1.18
NEK3P51956 AC002486.2-201ENST00000447806 590 ntBASIC7.7□□□□□ -1.18
NEK3P51956 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC7.7□□□□□ -1.18
NEK3P51956 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.7□□□□□ -1.18
NEK3P51956 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC7.7□□□□□ -1.18
NEK3P51956 AC114755.1-201ENST00000453101 868 ntBASIC7.7□□□□□ -1.18
NEK3P51956 MRPS21P1-201ENST00000453850 223 ntBASIC7.7□□□□□ -1.18
NEK3P51956 CHIAP1-201ENST00000456220 995 ntBASIC7.7□□□□□ -1.18
NEK3P51956 AC021146.10-201ENST00000515628 706 ntBASIC7.7□□□□□ -1.18
NEK3P51956 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC7.7□□□□□ -1.18
NEK3P51956 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC7.7□□□□□ -1.18
NEK3P51956 AP004833.3-201ENST00000531893 322 ntBASIC7.7□□□□□ -1.18
NEK3P51956 OR7E87P-201ENST00000532397 929 ntBASIC7.7□□□□□ -1.18
NEK3P51956 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.7□□□□□ -1.18
NEK3P51956 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.7□□□□□ -1.18
NEK3P51956 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
NEK3P51956 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC7.7□□□□□ -1.18
NEK3P51956 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC7.7□□□□□ -1.18
NEK3P51956 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC7.7□□□□□ -1.18
NEK3P51956 AL049840.6-201ENST00000604583 345 ntBASIC7.7□□□□□ -1.18
NEK3P51956 AC091167.5-201ENST00000605689 894 ntBASIC7.7□□□□□ -1.18
NEK3P51956 AL391597.1-201ENST00000618707 694 ntBASIC7.7□□□□□ -1.18
NEK3P51956 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NEK3P51956 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.7□□□□□ -1.18
NEK3P51956 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NEK3P51956 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NEK3P51956 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.7□□□□□ -1.18
NEK3P51956 CCDC162P-202ENST00000368966 6751 ntBASIC7.7□□□□□ -1.18
NEK3P51956 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.7□□□□□ -1.18
NEK3P51956 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.7□□□□□ -1.18
NEK3P51956 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NEK3P51956 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.69□□□□□ -1.18
NEK3P51956 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.69□□□□□ -1.18
NEK3P51956 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
NEK3P51956 AC018688.1-201ENST00000636528 1754 ntBASIC7.69□□□□□ -1.18
NEK3P51956 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NEK3P51956 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.69□□□□□ -1.18
NEK3P51956 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NEK3P51956 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NEK3P51956 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NEK3P51956 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.69□□□□□ -1.18
NEK3P51956 HSPA8P11-201ENST00000508840 1898 ntBASIC7.69□□□□□ -1.18
NEK3P51956 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NEK3P51956 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NEK3P51956 RNA5SP448-201ENST00000363151 111 ntBASIC7.69□□□□□ -1.18
NEK3P51956 SNORA51.7-201ENST00000384171 134 ntBASIC7.69□□□□□ -1.18
NEK3P51956 AC008171.1-201ENST00000395058 200 ntBASIC7.69□□□□□ -1.18
NEK3P51956 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.69□□□□□ -1.18
NEK3P51956 RAC1P4-201ENST00000419413 579 ntBASIC7.69□□□□□ -1.18
NEK3P51956 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC7.69□□□□□ -1.18
NEK3P51956 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.69□□□□□ -1.18
NEK3P51956 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NEK3P51956 AC019185.3-201ENST00000438805 323 ntBASIC7.69□□□□□ -1.18
NEK3P51956 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NEK3P51956 OR13C1P-201ENST00000457612 963 ntBASIC7.69□□□□□ -1.18
NEK3P51956 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC7.69□□□□□ -1.18
NEK3P51956 AC007688.1-201ENST00000475592 759 ntBASIC7.69□□□□□ -1.18
NEK3P51956 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.69□□□□□ -1.18
NEK3P51956 DKK2-202ENST00000510463 908 ntTSL 3 BASIC7.69□□□□□ -1.18
NEK3P51956 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC7.69□□□□□ -1.18
NEK3P51956 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NEK3P51956 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.69□□□□□ -1.18
NEK3P51956 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.69□□□□□ -1.18
NEK3P51956 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC7.69□□□□□ -1.18
NEK3P51956 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC7.69□□□□□ -1.18
NEK3P51956 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.69□□□□□ -1.18
NEK3P51956 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC7.69□□□□□ -1.18
NEK3P51956 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC7.69□□□□□ -1.18
NEK3P51956 HNRNPA1P67-201ENST00000604027 926 ntBASIC7.69□□□□□ -1.18
NEK3P51956 RPS28P1-201ENST00000604589 187 ntBASIC7.69□□□□□ -1.18
NEK3P51956 AC103724.4-201ENST00000605981 292 ntBASIC7.69□□□□□ -1.18
NEK3P51956 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC7.69□□□□□ -1.18
NEK3P51956 AC023310.4-201ENST00000613130 650 ntBASIC7.69□□□□□ -1.18
NEK3P51956 MIR6731-201ENST00000614863 72 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms