Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-DQB1P01920 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 AC013488.1-201ENST00000526618 1838 ntBASIC6.2□□□□□ -1.42
HLA-DQB1P01920 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 AC006116.1-201ENST00000587908 2171 ntBASIC6.2□□□□□ -1.42
HLA-DQB1P01920 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 RNA5SP378-201ENST00000363646 120 ntBASIC6.2□□□□□ -1.42
HLA-DQB1P01920 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 SSX6-201ENST00000376932 562 ntBASIC6.2□□□□□ -1.42
HLA-DQB1P01920 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 AL451136.1-201ENST00000435399 325 ntBASIC6.2□□□□□ -1.42
HLA-DQB1P01920 AC231532.1-201ENST00000438584 312 ntBASIC6.2□□□□□ -1.42
HLA-DQB1P01920 RPL4P2-201ENST00000447259 1282 ntBASIC6.2□□□□□ -1.42
HLA-DQB1P01920 RN7SL395P-201ENST00000462960 291 ntBASIC6.2□□□□□ -1.42
HLA-DQB1P01920 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 AC018659.2-201ENST00000624690 715 ntBASIC6.2□□□□□ -1.42
HLA-DQB1P01920 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 AC119674.1-204ENST00000641348 1343 ntBASIC6.2□□□□□ -1.42
HLA-DQB1P01920 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB1P01920 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 TGFB2-OT1-201ENST00000625474 1371 ntBASIC6.19□□□□□ -1.42
HLA-DQB1P01920 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 RNA5SP463-201ENST00000363030 120 ntBASIC6.19□□□□□ -1.42
HLA-DQB1P01920 RNU4-59P-201ENST00000364447 116 ntBASIC6.19□□□□□ -1.42
HLA-DQB1P01920 IMPG1-203ENST00000369963 868 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 MIR654-201ENST00000385199 81 ntBASIC6.19□□□□□ -1.42
HLA-DQB1P01920 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 SNORA2C-201ENST00000408564 137 ntBASIC6.19□□□□□ -1.42
HLA-DQB1P01920 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 AC011753.4-201ENST00000417974 311 ntBASIC6.19□□□□□ -1.42
HLA-DQB1P01920 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.19□□□□□ -1.42
HLA-DQB1P01920 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.19□□□□□ -1.42
HLA-DQB1P01920 ASPA-202ENST00000456349 1090 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 RPL17P2-201ENST00000491913 451 ntBASIC6.19□□□□□ -1.42
HLA-DQB1P01920 TPT1P5-201ENST00000511433 521 ntBASIC6.19□□□□□ -1.42
HLA-DQB1P01920 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 ADAM20P2-201ENST00000515830 1273 ntBASIC6.19□□□□□ -1.42
HLA-DQB1P01920 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DQB1P01920 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms