Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC7.74□□□□□ -1.17
NEK3P51956 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC7.74□□□□□ -1.17
NEK3P51956 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC7.74□□□□□ -1.17
NEK3P51956 AL590682.1-201ENST00000437248 344 ntBASIC7.74□□□□□ -1.17
NEK3P51956 SNX18P9-201ENST00000440580 835 ntBASIC7.74□□□□□ -1.17
NEK3P51956 AL137074.1-201ENST00000442640 465 ntBASIC7.74□□□□□ -1.17
NEK3P51956 ARMC8P1-201ENST00000443069 1289 ntBASIC7.74□□□□□ -1.17
NEK3P51956 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.74□□□□□ -1.17
NEK3P51956 AC016489.1-201ENST00000461109 375 ntBASIC7.74□□□□□ -1.17
NEK3P51956 RN7SL308P-201ENST00000464971 297 ntBASIC7.74□□□□□ -1.17
NEK3P51956 RN7SL228P-201ENST00000470060 303 ntBASIC7.74□□□□□ -1.17
NEK3P51956 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 OR2A3P-201ENST00000493774 953 ntBASIC7.74□□□□□ -1.17
NEK3P51956 RN7SL869P-201ENST00000497032 300 ntBASIC7.74□□□□□ -1.17
NEK3P51956 RN7SL104P-201ENST00000498686 293 ntBASIC7.74□□□□□ -1.17
NEK3P51956 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC7.74□□□□□ -1.17
NEK3P51956 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
NEK3P51956 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.74□□□□□ -1.17
NEK3P51956 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC7.74□□□□□ -1.17
NEK3P51956 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC7.74□□□□□ -1.17
NEK3P51956 MIR4786-201ENST00000583954 80 ntBASIC7.74□□□□□ -1.17
NEK3P51956 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.74□□□□□ -1.17
NEK3P51956 AC069499.2-201ENST00000610665 382 ntBASIC7.74□□□□□ -1.17
NEK3P51956 AL391903.2-201ENST00000614532 247 ntBASIC7.74□□□□□ -1.17
NEK3P51956 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.74□□□□□ -1.17
NEK3P51956 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC7.74□□□□□ -1.17
NEK3P51956 OR5AU1-204ENST00000641822 1197 ntBASIC7.74□□□□□ -1.17
NEK3P51956 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.74□□□□□ -1.17
NEK3P51956 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NEK3P51956 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NEK3P51956 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 AL359694.2-201ENST00000567753 1615 ntBASIC7.74□□□□□ -1.17
NEK3P51956 AL353898.3-201ENST00000624679 1755 ntBASIC7.74□□□□□ -1.17
NEK3P51956 EPS15P1-202ENST00000459691 2071 ntBASIC7.74□□□□□ -1.17
NEK3P51956 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
NEK3P51956 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.74□□□□□ -1.17
NEK3P51956 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NEK3P51956 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NEK3P51956 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NEK3P51956 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NEK3P51956 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.73□□□□□ -1.17
NEK3P51956 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
NEK3P51956 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC7.73□□□□□ -1.17
NEK3P51956 AC100810.3-201ENST00000633189 2240 ntBASIC7.73□□□□□ -1.17
NEK3P51956 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 RNU4-23P-201ENST00000362839 140 ntBASIC7.73□□□□□ -1.17
NEK3P51956 MIR301B-201ENST00000390813 78 ntBASIC7.73□□□□□ -1.17
NEK3P51956 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.73□□□□□ -1.17
NEK3P51956 MAML3-201ENST00000398940 831 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 AC009237.9-201ENST00000414800 347 ntBASIC7.73□□□□□ -1.17
NEK3P51956 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 AC140479.1-201ENST00000440423 337 ntBASIC7.73□□□□□ -1.17
NEK3P51956 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC7.73□□□□□ -1.17
NEK3P51956 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 AC104389.2-201ENST00000450768 887 ntBASIC7.73□□□□□ -1.17
NEK3P51956 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.73□□□□□ -1.17
NEK3P51956 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 HMGN1P8-201ENST00000463578 288 ntBASIC7.73□□□□□ -1.17
NEK3P51956 AC079768.1-201ENST00000503181 711 ntBASIC7.73□□□□□ -1.17
NEK3P51956 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC7.73□□□□□ -1.17
NEK3P51956 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC7.73□□□□□ -1.17
NEK3P51956 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC7.73□□□□□ -1.17
NEK3P51956 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.73□□□□□ -1.17
NEK3P51956 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC7.73□□□□□ -1.17
NEK3P51956 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NEK3P51956 AC243312.1-201ENST00000570582 275 ntBASIC7.73□□□□□ -1.17
NEK3P51956 RN7SL14P-201ENST00000579715 298 ntBASIC7.73□□□□□ -1.17
NEK3P51956 MIR4437-201ENST00000581331 60 ntBASIC7.73□□□□□ -1.17
NEK3P51956 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC7.73□□□□□ -1.17
NEK3P51956 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.73□□□□□ -1.17
NEK3P51956 AC107993.1-201ENST00000591343 684 ntBASIC7.73□□□□□ -1.17
NEK3P51956 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
NEK3P51956 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.73□□□□□ -1.17
NEK3P51956 AC143336.1-201ENST00000614164 836 ntBASIC7.73□□□□□ -1.17
NEK3P51956 AP000842.4-201ENST00000638781 748 ntBASIC7.73□□□□□ -1.17
NEK3P51956 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NEK3P51956 AC110716.2-201ENST00000563865 3945 ntBASIC7.73□□□□□ -1.17
NEK3P51956 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.73□□□□□ -1.17
NEK3P51956 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.73□□□□□ -1.17
NEK3P51956 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms