Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01558Q9Y6Z2 AC067852.2-201ENST00000590513 2313 ntBASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC01558Q9Y6Z2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 AC121338.2-201ENST00000622535 1744 ntBASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LINC01558Q9Y6Z2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01558Q9Y6Z2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms