Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 AC133041.1-202ENST00000642053 222 ntBASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
DDX49Q9Y6V7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.94■■□□□ 1.42
DDX49Q9Y6V7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX49Q9Y6V7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX49Q9Y6V7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX49Q9Y6V7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.93■■□□□ 1.42
DDX49Q9Y6V7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX49Q9Y6V7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
DDX49Q9Y6V7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX49Q9Y6V7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
DDX49Q9Y6V7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 BX276092.2-201ENST00000417668 665 ntBASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
DDX49Q9Y6V7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 AC073210.2-201ENST00000430369 194 ntBASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 RNA5SP413-201ENST00000516373 109 ntBASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX49Q9Y6V7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 POU5F1P4-201ENST00000413175 1085 ntBASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 AC066615.1-201ENST00000640911 628 ntBASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DDX49Q9Y6V7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
DDX49Q9Y6V7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
DDX49Q9Y6V7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
DDX49Q9Y6V7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
DDX49Q9Y6V7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms