Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP4B1Q9Y6B7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 AC022517.1-201ENST00000592429 346 ntBASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 AC005082.1-201ENST00000413042 2259 ntBASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.16■□□□□ 0.66
AP4B1Q9Y6B7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 KRT18P61-201ENST00000585825 1298 ntBASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 AC053503.5-201ENST00000601508 636 ntBASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 AC092666.2-201ENST00000613287 246 ntBASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 AC093503.3-201ENST00000624917 2352 ntBASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
AP4B1Q9Y6B7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.14■□□□□ 0.66
AP4B1Q9Y6B7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.14■□□□□ 0.66
AP4B1Q9Y6B7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
AP4B1Q9Y6B7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
AP4B1Q9Y6B7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
AP4B1Q9Y6B7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 EEF1DP3-203ENST00000566025 782 ntBASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 AC104187.1-201ENST00000607510 612 ntBASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP4B1Q9Y6B7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP4B1Q9Y6B7 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.13■□□□□ 0.65
AP4B1Q9Y6B7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP4B1Q9Y6B7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP4B1Q9Y6B7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP4B1Q9Y6B7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP4B1Q9Y6B7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP4B1Q9Y6B7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP4B1Q9Y6B7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.13■□□□□ 0.65
AP4B1Q9Y6B7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms