Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.17■■□□□ 1.3
CTDP1Q9Y5B0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 PLK5-205ENST00000642079 1969 ntBASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 AL049637.2-201ENST00000641778 930 ntBASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.16■■□□□ 1.3
CTDP1Q9Y5B0 AF106564.1-201ENST00000607058 2553 ntBASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 FP700111.2-201ENST00000619190 1892 ntBASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 KRT8P20-201ENST00000423953 1409 ntBASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTDP1Q9Y5B0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.14■■□□□ 1.3
CTDP1Q9Y5B0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.14■■□□□ 1.3
CTDP1Q9Y5B0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CTDP1Q9Y5B0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CTDP1Q9Y5B0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 NBPF21P-201ENST00000425093 1451 ntBASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 TSPY7P-201ENST00000431358 1114 ntBASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 RARRES2P10-201ENST00000564312 460 ntBASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTDP1Q9Y5B0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
CTDP1Q9Y5B0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.12■■□□□ 1.29
CTDP1Q9Y5B0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CTDP1Q9Y5B0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CTDP1Q9Y5B0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTDP1Q9Y5B0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTDP1Q9Y5B0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTDP1Q9Y5B0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CTDP1Q9Y5B0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CTDP1Q9Y5B0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms