Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LSM2Q9Y333 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LSM2Q9Y333 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM2Q9Y333 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LSM2Q9Y333 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LSM2Q9Y333 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LSM2Q9Y333 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
LSM2Q9Y333 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.78■□□□□ 0.44
LSM2Q9Y333 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM2Q9Y333 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.78■□□□□ 0.44
LSM2Q9Y333 MIR572-201ENST00000384983 95 ntBASIC17.78■□□□□ 0.44
LSM2Q9Y333 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM2Q9Y333 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.78■□□□□ 0.44
LSM2Q9Y333 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM2Q9Y333 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LSM2Q9Y333 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LSM2Q9Y333 CROCCP3-202ENST00000420820 1947 ntBASIC17.78■□□□□ 0.44
LSM2Q9Y333 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LSM2Q9Y333 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM2Q9Y333 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM2Q9Y333 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM2Q9Y333 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.77■□□□□ 0.44
LSM2Q9Y333 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.77■□□□□ 0.44
LSM2Q9Y333 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LSM2Q9Y333 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LSM2Q9Y333 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM2Q9Y333 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LSM2Q9Y333 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LSM2Q9Y333 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSM2Q9Y333 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LSM2Q9Y333 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSM2Q9Y333 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LSM2Q9Y333 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LSM2Q9Y333 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.77■□□□□ 0.43
LSM2Q9Y333 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.76■□□□□ 0.43
LSM2Q9Y333 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LSM2Q9Y333 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 UNC93B3-201ENST00000308076 687 ntBASIC17.76■□□□□ 0.43
LSM2Q9Y333 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
LSM2Q9Y333 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 AC024257.2-201ENST00000549699 147 ntBASIC17.76■□□□□ 0.43
LSM2Q9Y333 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.76■□□□□ 0.43
LSM2Q9Y333 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LSM2Q9Y333 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LSM2Q9Y333 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LSM2Q9Y333 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.76■□□□□ 0.43
LSM2Q9Y333 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LSM2Q9Y333 KRT87P-202ENST00000534226 1464 ntBASIC17.75■□□□□ 0.43
LSM2Q9Y333 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
LSM2Q9Y333 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
LSM2Q9Y333 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM2Q9Y333 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LSM2Q9Y333 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
LSM2Q9Y333 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.75■□□□□ 0.43
LSM2Q9Y333 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSM2Q9Y333 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.75■□□□□ 0.43
LSM2Q9Y333 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM2Q9Y333 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LSM2Q9Y333 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM2Q9Y333 AC099791.1-201ENST00000416440 715 ntBASIC17.75■□□□□ 0.43
LSM2Q9Y333 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.75■□□□□ 0.43
LSM2Q9Y333 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
LSM2Q9Y333 AC008764.7-201ENST00000593779 1081 ntBASIC17.75■□□□□ 0.43
LSM2Q9Y333 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.75■□□□□ 0.43
LSM2Q9Y333 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM2Q9Y333 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.75■□□□□ 0.43
LSM2Q9Y333 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM2Q9Y333 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LSM2Q9Y333 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM2Q9Y333 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
LSM2Q9Y333 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM2Q9Y333 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LSM2Q9Y333 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM2Q9Y333 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LSM2Q9Y333 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM2Q9Y333 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.74■□□□□ 0.43
LSM2Q9Y333 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.74■□□□□ 0.43
LSM2Q9Y333 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.74■□□□□ 0.43
LSM2Q9Y333 AL049812.1-201ENST00000432563 2267 ntBASIC17.74■□□□□ 0.43
LSM2Q9Y333 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LSM2Q9Y333 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM2Q9Y333 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.74■□□□□ 0.43
LSM2Q9Y333 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.74■□□□□ 0.43
LSM2Q9Y333 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM2Q9Y333 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LSM2Q9Y333 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM2Q9Y333 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LSM2Q9Y333 AC007613.1-201ENST00000572811 2597 ntBASIC17.74■□□□□ 0.43
LSM2Q9Y333 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms