Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 AC124283.5-201ENST00000624661 1809 ntBASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 KRASP1-201ENST00000407852 552 ntBASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLCF1Q9UBD9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCF1Q9UBD9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCF1Q9UBD9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCF1Q9UBD9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLCF1Q9UBD9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.83■□□□□ 0.45
CLCF1Q9UBD9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CLCF1Q9UBD9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.83■□□□□ 0.45
CLCF1Q9UBD9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 AL121906.2-201ENST00000621597 723 ntBASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLCF1Q9UBD9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 PRKY-204ENST00000533551 1019 ntBASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 AC110285.5-201ENST00000611501 352 ntBASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCF1Q9UBD9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 KRT8P17-201ENST00000453110 1448 ntBASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 DPP3P2-201ENST00000416030 1696 ntBASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 AC092720.2-201ENST00000602388 1665 ntBASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 MIR718-201ENST00000390190 70 ntBASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCF1Q9UBD9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.8■□□□□ 0.44
CLCF1Q9UBD9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.8■□□□□ 0.44
CLCF1Q9UBD9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCF1Q9UBD9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCF1Q9UBD9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLCF1Q9UBD9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms