Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
CPSF2Q9P2I0 AIRN-201ENST00000601203 4374 ntBASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 KRT18P14-201ENST00000534205 1250 ntBASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPSF2Q9P2I0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.08■□□□□ 0.81
CPSF2Q9P2I0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPSF2Q9P2I0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPSF2Q9P2I0 AC004854.2-201ENST00000608450 1441 ntBASIC20.08■□□□□ 0.8
CPSF2Q9P2I0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPSF2Q9P2I0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.08■□□□□ 0.8
CPSF2Q9P2I0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPSF2Q9P2I0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPSF2Q9P2I0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CPSF2Q9P2I0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPSF2Q9P2I0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.08■□□□□ 0.8
CPSF2Q9P2I0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CPSF2Q9P2I0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPSF2Q9P2I0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms