Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.22■□□□□ 0.83
NCKIPSDQ9NZQ3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 PCDHAC2-203ENST00000615316 3011 ntBASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 GCSHP5-201ENST00000443090 522 ntBASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 AL162377.1-201ENST00000618844 1793 ntBASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NCKIPSDQ9NZQ3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.83
NCKIPSDQ9NZQ3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 AC128676.1-201ENST00000454392 318 ntBASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 HLA-B-256ENST00000639848 1089 ntBASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 AL512408.1-201ENST00000569378 2000 ntBASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.2■□□□□ 0.82
NCKIPSDQ9NZQ3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 AC060766.5-201ENST00000590539 871 ntBASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NCKIPSDQ9NZQ3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NCKIPSDQ9NZQ3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms