Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 AC142381.2-201ENST00000566120 298 ntBASIC19.78■□□□□ 0.76
MKS1Q9NXB0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.78■□□□□ 0.76
MKS1Q9NXB0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.77■□□□□ 0.76
MKS1Q9NXB0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MKS1Q9NXB0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.77■□□□□ 0.75
MKS1Q9NXB0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 AC004854.2-201ENST00000608450 1441 ntBASIC19.76■□□□□ 0.75
MKS1Q9NXB0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 AP001271.2-201ENST00000624018 1556 ntBASIC19.76■□□□□ 0.75
MKS1Q9NXB0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 KRT8P17-201ENST00000453110 1448 ntBASIC19.76■□□□□ 0.75
MKS1Q9NXB0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.76■□□□□ 0.75
MKS1Q9NXB0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 AL139246.5-201ENST00000606645 996 ntBASIC19.75■□□□□ 0.75
MKS1Q9NXB0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
MKS1Q9NXB0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MKS1Q9NXB0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms