Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TLR9Q9NR96 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TLR9Q9NR96 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TLR9Q9NR96 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
TLR9Q9NR96 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.32■■□□□ 1
TLR9Q9NR96 AC113347.1-201ENST00000413321 391 ntBASIC21.32■■□□□ 1
TLR9Q9NR96 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.32■■□□□ 1
TLR9Q9NR96 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TLR9Q9NR96 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TLR9Q9NR96 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.32■■□□□ 1
TLR9Q9NR96 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TLR9Q9NR96 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TLR9Q9NR96 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TLR9Q9NR96 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TLR9Q9NR96 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
TLR9Q9NR96 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.32■■□□□ 1
TLR9Q9NR96 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.32■■□□□ 1
TLR9Q9NR96 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
TLR9Q9NR96 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TLR9Q9NR96 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TLR9Q9NR96 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.31■■□□□ 1
TLR9Q9NR96 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.31■■□□□ 1
TLR9Q9NR96 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.31■■□□□ 1
TLR9Q9NR96 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TLR9Q9NR96 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TLR9Q9NR96 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.31■■□□□ 1
TLR9Q9NR96 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.31■■□□□ 1
TLR9Q9NR96 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.31■■□□□ 1
TLR9Q9NR96 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.31■■□□□ 1
TLR9Q9NR96 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.31■■□□□ 1
TLR9Q9NR96 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.31■■□□□ 1
TLR9Q9NR96 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.31■■□□□ 1
TLR9Q9NR96 NAPSB-206ENST00000562112 1266 ntBASIC21.31■■□□□ 1
TLR9Q9NR96 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.31■■□□□ 1
TLR9Q9NR96 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.31■■□□□ 1
TLR9Q9NR96 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TLR9Q9NR96 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.31■■□□□ 1
TLR9Q9NR96 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TLR9Q9NR96 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TLR9Q9NR96 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TLR9Q9NR96 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.31■■□□□ 1
TLR9Q9NR96 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TLR9Q9NR96 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.3■■□□□ 1
TLR9Q9NR96 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TLR9Q9NR96 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.3■■□□□ 1
TLR9Q9NR96 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TLR9Q9NR96 ECEL1P1-201ENST00000373592 1742 ntBASIC21.3■■□□□ 1
TLR9Q9NR96 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
TLR9Q9NR96 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TLR9Q9NR96 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TLR9Q9NR96 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TLR9Q9NR96 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.3■■□□□ 1
TLR9Q9NR96 HLA-G-202ENST00000376815 851 ntBASIC21.3■■□□□ 1
TLR9Q9NR96 HLA-G-203ENST00000376818 1127 ntBASIC21.3■■□□□ 1
TLR9Q9NR96 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TLR9Q9NR96 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.3■■□□□ 1
TLR9Q9NR96 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.3■■□□□ 1
TLR9Q9NR96 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.3■■□□□ 1
TLR9Q9NR96 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.3■■□□□ 1
TLR9Q9NR96 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.3■■□□□ 1
TLR9Q9NR96 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.3■■□□□ 1
TLR9Q9NR96 CR392000.1-201ENST00000624770 1228 ntBASIC21.3■■□□□ 1
TLR9Q9NR96 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TLR9Q9NR96 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.3■■□□□ 1
TLR9Q9NR96 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TLR9Q9NR96 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
TLR9Q9NR96 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.29■■□□□ 1
TLR9Q9NR96 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.29■■□□□ 1
TLR9Q9NR96 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TLR9Q9NR96 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TLR9Q9NR96 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.29■■□□□ 1
TLR9Q9NR96 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.29■■□□□ 1
TLR9Q9NR96 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TLR9Q9NR96 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TLR9Q9NR96 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TLR9Q9NR96 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.29■■□□□ 1
TLR9Q9NR96 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TLR9Q9NR96 KSR1P1-201ENST00000446298 240 ntBASIC21.29■■□□□ 1
TLR9Q9NR96 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TLR9Q9NR96 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TLR9Q9NR96 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TLR9Q9NR96 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TLR9Q9NR96 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.29■■□□□ 1
TLR9Q9NR96 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TLR9Q9NR96 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TLR9Q9NR96 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.28■■□□□ 1
TLR9Q9NR96 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.28■■□□□ 1
TLR9Q9NR96 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.28■■□□□ 1
TLR9Q9NR96 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.28■■□□□ 1
TLR9Q9NR96 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.28■■□□□ 1
TLR9Q9NR96 NIFKP9-201ENST00000419265 221 ntBASIC21.28■■□□□ 1
TLR9Q9NR96 AL390955.1-201ENST00000428694 934 ntBASIC21.28■■□□□ 1
TLR9Q9NR96 KRT18P57-201ENST00000443599 1254 ntBASIC21.28■■□□□ 1
TLR9Q9NR96 AC116562.2-201ENST00000507042 360 ntBASIC21.28■■□□□ 1
TLR9Q9NR96 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.28■■□□□ 1
TLR9Q9NR96 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.28■■□□□ 1
TLR9Q9NR96 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.28■■□□□ 1
TLR9Q9NR96 FITM1-202ENST00000559294 800 ntBASIC21.28■■□□□ 1
TLR9Q9NR96 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.28■■□□□ 1
TLR9Q9NR96 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms