Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ZFYVE28Q9HCC9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZFYVE28Q9HCC9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 CRYGFP-201ENST00000418459 633 ntBASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 B3GAT3P1-201ENST00000471720 806 ntBASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 KRT18P56-201ENST00000507275 550 ntBASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 AC097488.1-201ENST00000507834 756 ntBASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.99■■□□□ 1.27
ZFYVE28Q9HCC9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 KRT126P-201ENST00000549467 1181 ntBASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.98■■□□□ 1.27
ZFYVE28Q9HCC9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 TPM4P1-201ENST00000436100 807 ntBASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 C1QL1P1-201ENST00000568105 661 ntBASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 FAM87A-204ENST00000613235 858 ntBASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ZFYVE28Q9HCC9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 AC117947.1-201ENST00000427448 529 ntBASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 AL121894.2-201ENST00000602977 491 ntBASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.96■■□□□ 1.27
ZFYVE28Q9HCC9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZFYVE28Q9HCC9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
ZFYVE28Q9HCC9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.95■■□□□ 1.26
ZFYVE28Q9HCC9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
ZFYVE28Q9HCC9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZFYVE28Q9HCC9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ZFYVE28Q9HCC9 FAM8A6P-201ENST00000407496 1135 ntBASIC22.95■■□□□ 1.26
ZFYVE28Q9HCC9 KRT8P20-201ENST00000423953 1409 ntBASIC22.95■■□□□ 1.26
ZFYVE28Q9HCC9 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.95■■□□□ 1.26
ZFYVE28Q9HCC9 AC011506.1-201ENST00000474329 610 ntBASIC22.95■■□□□ 1.26
ZFYVE28Q9HCC9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.95■■□□□ 1.26
ZFYVE28Q9HCC9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
ZFYVE28Q9HCC9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms