Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRTM1Q9HBL6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 AL158211.5-201ENST00000623583 2518 ntBASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 MCRIP2P1-201ENST00000394346 511 ntBASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 AC016769.1-201ENST00000409132 1010 ntBASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 RARRES2P4-201ENST00000514074 484 ntBASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRTM1Q9HBL6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 AC100791.3-201ENST00000617619 330 ntBASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LRTM1Q9HBL6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 CNN2P6-201ENST00000439038 900 ntBASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 DUX4L16-201ENST00000555130 1264 ntBASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LRTM1Q9HBL6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 AC068338.2-201ENST00000563278 1430 ntBASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 PTBP1P-201ENST00000554374 1601 ntBASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.21■□□□□ 0.67
LRTM1Q9HBL6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms