Protein–RNA interactions for Protein: Q9H930

SP140L, Nuclear body protein SP140-like protein, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP140LQ9H930 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SP140LQ9H930 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SP140LQ9H930 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SP140LQ9H930 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SP140LQ9H930 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SP140LQ9H930 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.13■□□□□ 0.49
SP140LQ9H930 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.13■□□□□ 0.49
SP140LQ9H930 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SP140LQ9H930 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SP140LQ9H930 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SP140LQ9H930 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SP140LQ9H930 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SP140LQ9H930 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SP140LQ9H930 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SP140LQ9H930 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SP140LQ9H930 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SP140LQ9H930 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SP140LQ9H930 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.12■□□□□ 0.49
SP140LQ9H930 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SP140LQ9H930 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.12■□□□□ 0.49
SP140LQ9H930 AC007225.1-201ENST00000566331 1836 ntBASIC18.12■□□□□ 0.49
SP140LQ9H930 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SP140LQ9H930 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SP140LQ9H930 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SP140LQ9H930 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.12■□□□□ 0.49
SP140LQ9H930 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SP140LQ9H930 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SP140LQ9H930 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SP140LQ9H930 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SP140LQ9H930 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SP140LQ9H930 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.12■□□□□ 0.49
SP140LQ9H930 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SP140LQ9H930 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SP140LQ9H930 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SP140LQ9H930 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SP140LQ9H930 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SP140LQ9H930 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SP140LQ9H930 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP140LQ9H930 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP140LQ9H930 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP140LQ9H930 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SP140LQ9H930 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.11■□□□□ 0.49
SP140LQ9H930 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.11■□□□□ 0.49
SP140LQ9H930 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SP140LQ9H930 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SP140LQ9H930 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SP140LQ9H930 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP140LQ9H930 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SP140LQ9H930 AC138907.5-202ENST00000569484 235 ntBASIC18.11■□□□□ 0.49
SP140LQ9H930 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SP140LQ9H930 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.11■□□□□ 0.49
SP140LQ9H930 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.11■□□□□ 0.49
SP140LQ9H930 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP140LQ9H930 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP140LQ9H930 AC005332.7-201ENST00000614046 2005 ntBASIC18.11■□□□□ 0.49
SP140LQ9H930 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP140LQ9H930 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SP140LQ9H930 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SP140LQ9H930 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP140LQ9H930 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP140LQ9H930 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.1■□□□□ 0.49
SP140LQ9H930 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SP140LQ9H930 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.1■□□□□ 0.49
SP140LQ9H930 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.1■□□□□ 0.49
SP140LQ9H930 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.1■□□□□ 0.49
SP140LQ9H930 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP140LQ9H930 AC121338.2-201ENST00000622535 1744 ntBASIC18.1■□□□□ 0.49
SP140LQ9H930 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP140LQ9H930 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SP140LQ9H930 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SP140LQ9H930 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.1■□□□□ 0.49
SP140LQ9H930 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.1■□□□□ 0.49
SP140LQ9H930 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.1■□□□□ 0.49
SP140LQ9H930 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.1■□□□□ 0.49
SP140LQ9H930 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SP140LQ9H930 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SP140LQ9H930 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.1■□□□□ 0.49
SP140LQ9H930 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.1■□□□□ 0.49
SP140LQ9H930 TCF3P1-201ENST00000423021 1937 ntBASIC18.1■□□□□ 0.49
SP140LQ9H930 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SP140LQ9H930 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
SP140LQ9H930 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.09■□□□□ 0.49
SP140LQ9H930 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.09■□□□□ 0.49
SP140LQ9H930 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SP140LQ9H930 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SP140LQ9H930 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.09■□□□□ 0.49
SP140LQ9H930 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.09■□□□□ 0.49
SP140LQ9H930 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.09■□□□□ 0.49
SP140LQ9H930 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.09■□□□□ 0.49
SP140LQ9H930 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SP140LQ9H930 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SP140LQ9H930 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SP140LQ9H930 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SP140LQ9H930 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SP140LQ9H930 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.08■□□□□ 0.49
SP140LQ9H930 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SP140LQ9H930 KRT16P2-201ENST00000414673 1423 ntBASIC18.08■□□□□ 0.49
SP140LQ9H930 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SP140LQ9H930 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SP140LQ9H930 LTB4R2-202ENST00000528054 3092 ntBASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms