Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 CD99P1-205ENST00000527459 561 ntBASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 MIR4758-201ENST00000577688 71 ntBASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SUDS3Q9H7L9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.39■□□□□ 0.86
SUDS3Q9H7L9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.39■□□□□ 0.86
SUDS3Q9H7L9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SUDS3Q9H7L9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.39■□□□□ 0.86
SUDS3Q9H7L9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 AL162412.1-201ENST00000567129 965 ntBASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 AC133041.1-202ENST00000642053 222 ntBASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SUDS3Q9H7L9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.38■□□□□ 0.85
SUDS3Q9H7L9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 LSM12P1-201ENST00000411836 588 ntBASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 AL512625.2-201ENST00000417533 625 ntBASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 KRT18P6-201ENST00000555540 1265 ntBASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SUDS3Q9H7L9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SUDS3Q9H7L9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SUDS3Q9H7L9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SUDS3Q9H7L9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SUDS3Q9H7L9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SUDS3Q9H7L9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SUDS3Q9H7L9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SUDS3Q9H7L9 AL512408.1-201ENST00000569378 2000 ntBASIC20.36■□□□□ 0.85
SUDS3Q9H7L9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.36■□□□□ 0.85
SUDS3Q9H7L9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SUDS3Q9H7L9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SUDS3Q9H7L9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.36■□□□□ 0.85
SUDS3Q9H7L9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms