Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PIF1Q9H611 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PIF1Q9H611 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PIF1Q9H611 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PIF1Q9H611 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PIF1Q9H611 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PIF1Q9H611 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PIF1Q9H611 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PIF1Q9H611 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.07■□□□□ 0.64
PIF1Q9H611 AC010141.2-201ENST00000452426 721 ntBASIC19.07■□□□□ 0.64
PIF1Q9H611 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.07■□□□□ 0.64
PIF1Q9H611 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PIF1Q9H611 AC104187.1-201ENST00000607510 612 ntBASIC19.07■□□□□ 0.64
PIF1Q9H611 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.07■□□□□ 0.64
PIF1Q9H611 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
PIF1Q9H611 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PIF1Q9H611 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PIF1Q9H611 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PIF1Q9H611 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PIF1Q9H611 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PIF1Q9H611 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PIF1Q9H611 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PIF1Q9H611 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PIF1Q9H611 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PIF1Q9H611 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PIF1Q9H611 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PIF1Q9H611 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PIF1Q9H611 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.06■□□□□ 0.64
PIF1Q9H611 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PIF1Q9H611 YBX1P1-201ENST00000445822 960 ntBASIC19.06■□□□□ 0.64
PIF1Q9H611 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.06■□□□□ 0.64
PIF1Q9H611 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PIF1Q9H611 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.06■□□□□ 0.64
PIF1Q9H611 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PIF1Q9H611 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.05■□□□□ 0.64
PIF1Q9H611 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PIF1Q9H611 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.05■□□□□ 0.64
PIF1Q9H611 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PIF1Q9H611 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PIF1Q9H611 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PIF1Q9H611 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PIF1Q9H611 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PIF1Q9H611 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PIF1Q9H611 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PIF1Q9H611 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PIF1Q9H611 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PIF1Q9H611 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.05■□□□□ 0.64
PIF1Q9H611 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PIF1Q9H611 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PIF1Q9H611 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PIF1Q9H611 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.05■□□□□ 0.64
PIF1Q9H611 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.05■□□□□ 0.64
PIF1Q9H611 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PIF1Q9H611 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PIF1Q9H611 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.05■□□□□ 0.64
PIF1Q9H611 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PIF1Q9H611 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PIF1Q9H611 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
PIF1Q9H611 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PIF1Q9H611 LINC02228-203ENST00000641970 1355 ntBASIC19.05■□□□□ 0.64
PIF1Q9H611 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PIF1Q9H611 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
PIF1Q9H611 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.04■□□□□ 0.64
PIF1Q9H611 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.04■□□□□ 0.64
PIF1Q9H611 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PIF1Q9H611 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PIF1Q9H611 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PIF1Q9H611 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PIF1Q9H611 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.04■□□□□ 0.64
PIF1Q9H611 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.04■□□□□ 0.64
PIF1Q9H611 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.04■□□□□ 0.64
PIF1Q9H611 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.04■□□□□ 0.64
PIF1Q9H611 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.04■□□□□ 0.64
PIF1Q9H611 AC004408.2-201ENST00000623613 2777 ntBASIC19.04■□□□□ 0.64
PIF1Q9H611 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PIF1Q9H611 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.04■□□□□ 0.64
PIF1Q9H611 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PIF1Q9H611 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PIF1Q9H611 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PIF1Q9H611 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PIF1Q9H611 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PIF1Q9H611 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PIF1Q9H611 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.03■□□□□ 0.64
PIF1Q9H611 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PIF1Q9H611 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PIF1Q9H611 KRT8P36-201ENST00000489121 1440 ntBASIC19.03■□□□□ 0.64
PIF1Q9H611 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PIF1Q9H611 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PIF1Q9H611 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PIF1Q9H611 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.03■□□□□ 0.64
PIF1Q9H611 AP001160.3-201ENST00000601484 763 ntBASIC19.03■□□□□ 0.64
PIF1Q9H611 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PIF1Q9H611 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.03■□□□□ 0.64
PIF1Q9H611 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.03■□□□□ 0.64
PIF1Q9H611 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.03■□□□□ 0.64
PIF1Q9H611 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PIF1Q9H611 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PIF1Q9H611 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PIF1Q9H611 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.02■□□□□ 0.64
PIF1Q9H611 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms