Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHRDQ9H2X0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.17■□□□□ 0.82
CHRDQ9H2X0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.17■□□□□ 0.82
CHRDQ9H2X0 ATP5G1P1-201ENST00000448724 379 ntBASIC20.17■□□□□ 0.82
CHRDQ9H2X0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.17■□□□□ 0.82
CHRDQ9H2X0 AC026271.3-201ENST00000571884 352 ntBASIC20.17■□□□□ 0.82
CHRDQ9H2X0 AP005242.2-201ENST00000580065 1175 ntBASIC20.17■□□□□ 0.82
CHRDQ9H2X0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CHRDQ9H2X0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CHRDQ9H2X0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHRDQ9H2X0 FSCN1P1-201ENST00000568912 1481 ntBASIC20.17■□□□□ 0.82
CHRDQ9H2X0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 EGLN1P1-201ENST00000531623 762 ntBASIC20.16■□□□□ 0.82
CHRDQ9H2X0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CHRDQ9H2X0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 MESTP1-201ENST00000404287 994 ntBASIC20.15■□□□□ 0.82
CHRDQ9H2X0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHRDQ9H2X0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHRDQ9H2X0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHRDQ9H2X0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 PTBP1P-201ENST00000554374 1601 ntBASIC20.14■□□□□ 0.81
CHRDQ9H2X0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 TSPY14P-201ENST00000303979 915 ntBASIC20.14■□□□□ 0.81
CHRDQ9H2X0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 DGCR10-201ENST00000609839 495 ntBASIC20.14■□□□□ 0.81
CHRDQ9H2X0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
CHRDQ9H2X0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.13■□□□□ 0.81
CHRDQ9H2X0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 C1QL1P1-201ENST00000568105 661 ntBASIC20.13■□□□□ 0.81
CHRDQ9H2X0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 AL445675.2-201ENST00000620291 557 ntBASIC20.13■□□□□ 0.81
CHRDQ9H2X0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.13■□□□□ 0.81
CHRDQ9H2X0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHRDQ9H2X0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms