Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 AL023803.3-201ENST00000615559 522 ntBASIC19.28■□□□□ 0.68
SPTBN4Q9H254 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.28■□□□□ 0.68
SPTBN4Q9H254 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.27■□□□□ 0.68
SPTBN4Q9H254 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPTBN4Q9H254 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SPTBN4Q9H254 AC116562.4-202ENST00000641738 218 ntBASIC19.27■□□□□ 0.68
SPTBN4Q9H254 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPTBN4Q9H254 KRT8P8-201ENST00000434750 1448 ntBASIC19.27■□□□□ 0.67
SPTBN4Q9H254 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SPTBN4Q9H254 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SPTBN4Q9H254 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SPTBN4Q9H254 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SPTBN4Q9H254 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.67
SPTBN4Q9H254 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SPTBN4Q9H254 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 AL512604.3-201ENST00000569583 964 ntBASIC19.26■□□□□ 0.67
SPTBN4Q9H254 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPTBN4Q9H254 AC092338.2-201ENST00000568827 1415 ntBASIC19.25■□□□□ 0.67
SPTBN4Q9H254 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPTBN4Q9H254 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SPTBN4Q9H254 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPTBN4Q9H254 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPTBN4Q9H254 AC079781.3-201ENST00000449110 356 ntBASIC19.25■□□□□ 0.67
SPTBN4Q9H254 KRT18P38-201ENST00000449496 1282 ntBASIC19.25■□□□□ 0.67
SPTBN4Q9H254 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.25■□□□□ 0.67
SPTBN4Q9H254 AC027796.2-201ENST00000575326 344 ntBASIC19.25■□□□□ 0.67
SPTBN4Q9H254 AC010653.2-201ENST00000623505 997 ntBASIC19.25■□□□□ 0.67
SPTBN4Q9H254 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPTBN4Q9H254 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.25■□□□□ 0.67
SPTBN4Q9H254 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPTBN4Q9H254 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPTBN4Q9H254 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPTBN4Q9H254 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.25■□□□□ 0.67
SPTBN4Q9H254 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPTBN4Q9H254 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.25■□□□□ 0.67
SPTBN4Q9H254 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPTBN4Q9H254 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPTBN4Q9H254 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SPTBN4Q9H254 MRPL3P1-201ENST00000400109 1033 ntBASIC19.24■□□□□ 0.67
SPTBN4Q9H254 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPTBN4Q9H254 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.24■□□□□ 0.67
SPTBN4Q9H254 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPTBN4Q9H254 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SPTBN4Q9H254 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPTBN4Q9H254 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPTBN4Q9H254 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPTBN4Q9H254 AC087742.1-201ENST00000575880 1738 ntBASIC19.24■□□□□ 0.67
SPTBN4Q9H254 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 KRT18P58-201ENST00000527480 1120 ntBASIC19.23■□□□□ 0.67
SPTBN4Q9H254 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPTBN4Q9H254 ANOS2P-203ENST00000472227 1816 ntBASIC19.22■□□□□ 0.67
SPTBN4Q9H254 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPTBN4Q9H254 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.22■□□□□ 0.67
SPTBN4Q9H254 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPTBN4Q9H254 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.22■□□□□ 0.67
SPTBN4Q9H254 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.22■□□□□ 0.67
SPTBN4Q9H254 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SPTBN4Q9H254 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms