Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDH11XQ9BZA7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDH11XQ9BZA7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDH11XQ9BZA7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDH11XQ9BZA7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDH11XQ9BZA7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDH11XQ9BZA7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDH11XQ9BZA7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC26.14■■□□□ 1.77
PCDH11XQ9BZA7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC26.14■■□□□ 1.77
PCDH11XQ9BZA7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC26.14■■□□□ 1.77
PCDH11XQ9BZA7 C1QL1P1-201ENST00000568105 661 ntBASIC26.14■■□□□ 1.77
PCDH11XQ9BZA7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC26.14■■□□□ 1.77
PCDH11XQ9BZA7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDH11XQ9BZA7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDH11XQ9BZA7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDH11XQ9BZA7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDH11XQ9BZA7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDH11XQ9BZA7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDH11XQ9BZA7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDH11XQ9BZA7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 H19-201ENST00000411754 1788 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 FBXW4P1-201ENST00000426721 2239 ntBASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 SLC25A3P1-201ENST00000443844 931 ntBASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC26.12■■□□□ 1.77
PCDH11XQ9BZA7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 KRT8P17-201ENST00000453110 1448 ntBASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 AC073508.3-201ENST00000619697 1419 ntBASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 NME3-204ENST00000563498 920 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 AC026271.3-201ENST00000571884 352 ntBASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.11■■□□□ 1.77
PCDH11XQ9BZA7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.1■■□□□ 1.77
PCDH11XQ9BZA7 AL121603.2-201ENST00000557373 2117 ntBASIC26.1■■□□□ 1.77
PCDH11XQ9BZA7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC26.1■■□□□ 1.77
PCDH11XQ9BZA7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC26.1■■□□□ 1.77
PCDH11XQ9BZA7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC26.1■■□□□ 1.77
PCDH11XQ9BZA7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC26.1■■□□□ 1.77
PCDH11XQ9BZA7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.1■■□□□ 1.77
PCDH11XQ9BZA7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDH11XQ9BZA7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 AL137013.1-201ENST00000432946 1228 ntBASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 AL031985.4-201ENST00000642138 673 ntBASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDH11XQ9BZA7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC26.08■■□□□ 1.77
PCDH11XQ9BZA7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCDH11XQ9BZA7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
PCDH11XQ9BZA7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDH11XQ9BZA7 MESTP1-201ENST00000404287 994 ntBASIC26.08■■□□□ 1.77
PCDH11XQ9BZA7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
PCDH11XQ9BZA7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC26.08■■□□□ 1.77
PCDH11XQ9BZA7 AL445675.2-201ENST00000620291 557 ntBASIC26.08■■□□□ 1.77
PCDH11XQ9BZA7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PCDH11XQ9BZA7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
PCDH11XQ9BZA7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
PCDH11XQ9BZA7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
PCDH11XQ9BZA7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.07■■□□□ 1.76
PCDH11XQ9BZA7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDH11XQ9BZA7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDH11XQ9BZA7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms