Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CDCA4Q9BXL8 AC009237.14-201ENST00000609975 1594 ntBASIC17.95■□□□□ 0.46
CDCA4Q9BXL8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.95■□□□□ 0.46
CDCA4Q9BXL8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.95■□□□□ 0.46
CDCA4Q9BXL8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDCA4Q9BXL8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 SUDS3P1-201ENST00000505831 966 ntBASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 AC142381.2-201ENST00000566120 298 ntBASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CDCA4Q9BXL8 AC005082.1-201ENST00000413042 2259 ntBASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CDCA4Q9BXL8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 MIR4767-201ENST00000582827 78 ntBASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 AL031432.3-201ENST00000607698 485 ntBASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA4Q9BXL8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 AC091305.1-201ENST00000479476 895 ntBASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.91■□□□□ 0.46
CDCA4Q9BXL8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA4Q9BXL8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CDCA4Q9BXL8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.9■□□□□ 0.46
CDCA4Q9BXL8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA4Q9BXL8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA4Q9BXL8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms