Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SSBP3Q9BWW4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 AC007225.1-201ENST00000566331 1836 ntBASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 AC098590.1-201ENST00000468126 897 ntBASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 AC142381.4-202ENST00000563973 229 ntBASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 AC069544.1-201ENST00000609399 999 ntBASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SSBP3Q9BWW4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 AL158047.1-201ENST00000445918 881 ntBASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 AC120498.8-201ENST00000614275 531 ntBASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.67■□□□□ 0.26
SSBP3Q9BWW4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 HLA-G-202ENST00000376815 851 ntBASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 HLA-G-203ENST00000376818 1127 ntBASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 GCSHP5-201ENST00000443090 522 ntBASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSBP3Q9BWW4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSBP3Q9BWW4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms