Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VRK1Q99986 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VRK1Q99986 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
VRK1Q99986 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VRK1Q99986 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VRK1Q99986 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VRK1Q99986 PCDHAC2-203ENST00000615316 3011 ntBASIC17.59■□□□□ 0.41
VRK1Q99986 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
VRK1Q99986 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VRK1Q99986 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VRK1Q99986 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VRK1Q99986 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.59■□□□□ 0.41
VRK1Q99986 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VRK1Q99986 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.59■□□□□ 0.41
VRK1Q99986 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.59■□□□□ 0.41
VRK1Q99986 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VRK1Q99986 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.59■□□□□ 0.41
VRK1Q99986 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.59■□□□□ 0.41
VRK1Q99986 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VRK1Q99986 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VRK1Q99986 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.59■□□□□ 0.41
VRK1Q99986 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
VRK1Q99986 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
VRK1Q99986 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VRK1Q99986 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.59■□□□□ 0.41
VRK1Q99986 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VRK1Q99986 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VRK1Q99986 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
VRK1Q99986 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
VRK1Q99986 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.58■□□□□ 0.41
VRK1Q99986 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VRK1Q99986 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
VRK1Q99986 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK1Q99986 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK1Q99986 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK1Q99986 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
VRK1Q99986 AC091874.3-201ENST00000512672 1195 ntBASIC17.58■□□□□ 0.4
VRK1Q99986 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK1Q99986 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK1Q99986 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.58■□□□□ 0.4
VRK1Q99986 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK1Q99986 GABARAPL3-202ENST00000624044 1851 ntBASIC17.58■□□□□ 0.4
VRK1Q99986 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VRK1Q99986 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK1Q99986 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.58■□□□□ 0.4
VRK1Q99986 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK1Q99986 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK1Q99986 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VRK1Q99986 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VRK1Q99986 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VRK1Q99986 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
VRK1Q99986 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VRK1Q99986 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
VRK1Q99986 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.57■□□□□ 0.4
VRK1Q99986 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
VRK1Q99986 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.57■□□□□ 0.4
VRK1Q99986 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.57■□□□□ 0.4
VRK1Q99986 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.57■□□□□ 0.4
VRK1Q99986 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.57■□□□□ 0.4
VRK1Q99986 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.57■□□□□ 0.4
VRK1Q99986 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.57■□□□□ 0.4
VRK1Q99986 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
VRK1Q99986 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.57■□□□□ 0.4
VRK1Q99986 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
VRK1Q99986 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VRK1Q99986 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VRK1Q99986 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.56■□□□□ 0.4
VRK1Q99986 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
VRK1Q99986 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK1Q99986 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK1Q99986 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK1Q99986 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
VRK1Q99986 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VRK1Q99986 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK1Q99986 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.56■□□□□ 0.4
VRK1Q99986 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK1Q99986 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK1Q99986 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK1Q99986 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK1Q99986 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VRK1Q99986 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.56■□□□□ 0.4
VRK1Q99986 MCRIP2P1-201ENST00000394346 511 ntBASIC17.56■□□□□ 0.4
VRK1Q99986 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.56■□□□□ 0.4
VRK1Q99986 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VRK1Q99986 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms