Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD1Q96RS6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.66■□□□□ 0.9
NUDCD1Q96RS6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD1Q96RS6 BX276092.2-201ENST00000417668 665 ntBASIC20.66■□□□□ 0.9
NUDCD1Q96RS6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.66■□□□□ 0.9
NUDCD1Q96RS6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.66■□□□□ 0.9
NUDCD1Q96RS6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD1Q96RS6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.66■□□□□ 0.9
NUDCD1Q96RS6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.66■□□□□ 0.9
NUDCD1Q96RS6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD1Q96RS6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUDCD1Q96RS6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 KRT17P1-201ENST00000399211 1546 ntBASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 KRT8P36-201ENST00000489121 1440 ntBASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 AL589743.5-201ENST00000616611 1050 ntBASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 AC105020.6-201ENST00000621523 1217 ntBASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUDCD1Q96RS6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.64■□□□□ 0.9
NUDCD1Q96RS6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.64■□□□□ 0.9
NUDCD1Q96RS6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUDCD1Q96RS6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 PCDHAC2-203ENST00000615316 3011 ntBASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUDCD1Q96RS6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 LSM12P1-201ENST00000411836 588 ntBASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.63■□□□□ 0.89
NUDCD1Q96RS6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 AC092118.2-201ENST00000613495 667 ntBASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.62■□□□□ 0.89
NUDCD1Q96RS6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.61■□□□□ 0.89
NUDCD1Q96RS6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD1Q96RS6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD1Q96RS6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.61■□□□□ 0.89
NUDCD1Q96RS6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
NUDCD1Q96RS6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD1Q96RS6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD1Q96RS6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NUDCD1Q96RS6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.61■□□□□ 0.89
NUDCD1Q96RS6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUDCD1Q96RS6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms