Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX18Q96RF0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX18Q96RF0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX18Q96RF0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX18Q96RF0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX18Q96RF0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX18Q96RF0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX18Q96RF0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.18■□□□□ 0.5
SNX18Q96RF0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.18■□□□□ 0.5
SNX18Q96RF0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX18Q96RF0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SNX18Q96RF0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX18Q96RF0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX18Q96RF0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX18Q96RF0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SNX18Q96RF0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX18Q96RF0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SNX18Q96RF0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX18Q96RF0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX18Q96RF0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX18Q96RF0 KRT8P36-201ENST00000489121 1440 ntBASIC18.17■□□□□ 0.5
SNX18Q96RF0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.17■□□□□ 0.5
SNX18Q96RF0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX18Q96RF0 CDV3P1-201ENST00000471403 739 ntBASIC18.17■□□□□ 0.5
SNX18Q96RF0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX18Q96RF0 KRT18P61-201ENST00000585825 1298 ntBASIC18.17■□□□□ 0.5
SNX18Q96RF0 FAM21FP-204ENST00000608637 956 ntBASIC18.17■□□□□ 0.5
SNX18Q96RF0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SNX18Q96RF0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX18Q96RF0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SNX18Q96RF0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX18Q96RF0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SNX18Q96RF0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX18Q96RF0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX18Q96RF0 AC004408.2-201ENST00000623613 2777 ntBASIC18.17■□□□□ 0.5
SNX18Q96RF0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX18Q96RF0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SNX18Q96RF0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX18Q96RF0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX18Q96RF0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX18Q96RF0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SNX18Q96RF0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX18Q96RF0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX18Q96RF0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX18Q96RF0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX18Q96RF0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX18Q96RF0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX18Q96RF0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX18Q96RF0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.16■□□□□ 0.5
SNX18Q96RF0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNX18Q96RF0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX18Q96RF0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX18Q96RF0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX18Q96RF0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX18Q96RF0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX18Q96RF0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX18Q96RF0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX18Q96RF0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX18Q96RF0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX18Q96RF0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX18Q96RF0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX18Q96RF0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX18Q96RF0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX18Q96RF0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SNX18Q96RF0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX18Q96RF0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX18Q96RF0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX18Q96RF0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX18Q96RF0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX18Q96RF0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNX18Q96RF0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SNX18Q96RF0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX18Q96RF0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX18Q96RF0 AC099778.1-201ENST00000568593 1911 ntBASIC18.14■□□□□ 0.49
SNX18Q96RF0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX18Q96RF0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX18Q96RF0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
SNX18Q96RF0 MYCNOS-205ENST00000641950 531 ntBASIC18.14■□□□□ 0.49
SNX18Q96RF0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX18Q96RF0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX18Q96RF0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.14■□□□□ 0.49
SNX18Q96RF0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX18Q96RF0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX18Q96RF0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNX18Q96RF0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.14■□□□□ 0.49
SNX18Q96RF0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNX18Q96RF0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms