Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CNTNAP3BQ96NU0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 INGX-201ENST00000359239 846 ntBASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 SLC25A1P4-201ENST00000567977 778 ntBASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNTNAP3BQ96NU0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 LINC00526-201ENST00000581067 1875 ntBASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNTNAP3BQ96NU0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.14■□□□□ 0.66
CNTNAP3BQ96NU0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 AC092183.1-201ENST00000469884 875 ntBASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 AL121829.2-201ENST00000620908 328 ntBASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.14■□□□□ 0.65
CNTNAP3BQ96NU0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 AL671277.2-201ENST00000458060 996 ntBASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 AC111152.3-201ENST00000569699 673 ntBASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 AL138966.2-201ENST00000621997 464 ntBASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNTNAP3BQ96NU0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms