Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLPTM1LQ96KA5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.2■□□□□ 0.66
CLPTM1LQ96KA5 AC104581.1-202ENST00000635932 2618 ntBASIC19.2■□□□□ 0.66
CLPTM1LQ96KA5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLPTM1LQ96KA5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.19■□□□□ 0.66
CLPTM1LQ96KA5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 AC018470.1-201ENST00000624790 3129 ntBASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLPTM1LQ96KA5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 LINC01465-201ENST00000408887 1940 ntBASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 AC020763.4-201ENST00000623414 4170 ntBASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CLPTM1LQ96KA5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 DUX4L19-201ENST00000557448 1267 ntBASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.16■□□□□ 0.66
CLPTM1LQ96KA5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms