Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TIMD4Q96H15 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.84■□□□□ 0.29
TIMD4Q96H15 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMD4Q96H15 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMD4Q96H15 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TIMD4Q96H15 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMD4Q96H15 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TIMD4Q96H15 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TIMD4Q96H15 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TIMD4Q96H15 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TIMD4Q96H15 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
TIMD4Q96H15 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TIMD4Q96H15 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMD4Q96H15 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TIMD4Q96H15 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMD4Q96H15 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TIMD4Q96H15 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMD4Q96H15 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMD4Q96H15 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMD4Q96H15 AC239809.2-201ENST00000415381 517 ntBASIC16.83■□□□□ 0.28
TIMD4Q96H15 KRT8P20-201ENST00000423953 1409 ntBASIC16.83■□□□□ 0.28
TIMD4Q96H15 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.83■□□□□ 0.28
TIMD4Q96H15 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.83■□□□□ 0.28
TIMD4Q96H15 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.83■□□□□ 0.28
TIMD4Q96H15 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.83■□□□□ 0.28
TIMD4Q96H15 RPPH1-201ENST00000516869 333 ntBASIC16.83■□□□□ 0.28
TIMD4Q96H15 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.83■□□□□ 0.28
TIMD4Q96H15 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TIMD4Q96H15 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMD4Q96H15 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.83■□□□□ 0.28
TIMD4Q96H15 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.83■□□□□ 0.28
TIMD4Q96H15 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TIMD4Q96H15 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.83■□□□□ 0.28
TIMD4Q96H15 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMD4Q96H15 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.83■□□□□ 0.28
TIMD4Q96H15 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.83■□□□□ 0.28
TIMD4Q96H15 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.83■□□□□ 0.28
TIMD4Q96H15 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TIMD4Q96H15 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMD4Q96H15 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMD4Q96H15 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMD4Q96H15 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMD4Q96H15 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMD4Q96H15 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMD4Q96H15 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMD4Q96H15 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMD4Q96H15 AL359736.2-201ENST00000621992 437 ntBASIC16.82■□□□□ 0.28
TIMD4Q96H15 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMD4Q96H15 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMD4Q96H15 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMD4Q96H15 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TIMD4Q96H15 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMD4Q96H15 AC007225.1-201ENST00000566331 1836 ntBASIC16.82■□□□□ 0.28
TIMD4Q96H15 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMD4Q96H15 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TIMD4Q96H15 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TIMD4Q96H15 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.81■□□□□ 0.28
TIMD4Q96H15 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMD4Q96H15 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 AL031963.3-201ENST00000606441 850 ntBASIC16.81■□□□□ 0.28
TIMD4Q96H15 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMD4Q96H15 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.81■□□□□ 0.28
TIMD4Q96H15 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMD4Q96H15 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TIMD4Q96H15 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMD4Q96H15 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMD4Q96H15 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMD4Q96H15 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMD4Q96H15 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TIMD4Q96H15 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.8■□□□□ 0.28
TIMD4Q96H15 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMD4Q96H15 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms