Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RNF138Q8WVD3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF138Q8WVD3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF138Q8WVD3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF138Q8WVD3 AC116351.2-201ENST00000606540 1585 ntBASIC18.17■□□□□ 0.5
RNF138Q8WVD3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF138Q8WVD3 AC124283.5-201ENST00000624661 1809 ntBASIC18.16■□□□□ 0.5
RNF138Q8WVD3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 TCF3P1-201ENST00000423021 1937 ntBASIC18.16■□□□□ 0.5
RNF138Q8WVD3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 KRT17P3-201ENST00000420566 1262 ntBASIC18.16■□□□□ 0.5
RNF138Q8WVD3 AC128676.1-201ENST00000454392 318 ntBASIC18.16■□□□□ 0.5
RNF138Q8WVD3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 AC233263.1-201ENST00000578059 224 ntBASIC18.16■□□□□ 0.5
RNF138Q8WVD3 MTDHP1-201ENST00000605323 784 ntBASIC18.16■□□□□ 0.5
RNF138Q8WVD3 AC006058.3-201ENST00000606217 1069 ntBASIC18.16■□□□□ 0.5
RNF138Q8WVD3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 AC073648.6-201ENST00000641589 218 ntBASIC18.16■□□□□ 0.5
RNF138Q8WVD3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF138Q8WVD3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 AL121906.2-201ENST00000621597 723 ntBASIC18.15■□□□□ 0.5
RNF138Q8WVD3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 PHGDH-210ENST00000641115 1638 ntBASIC18.15■□□□□ 0.5
RNF138Q8WVD3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RNF138Q8WVD3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF138Q8WVD3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF138Q8WVD3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms