Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.27■□□□□ 0.84
PTCD2Q8WV60 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTCD2Q8WV60 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PTCD2Q8WV60 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.27■□□□□ 0.83
PTCD2Q8WV60 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 BX119927.1-201ENST00000636596 1552 ntBASIC20.26■□□□□ 0.83
PTCD2Q8WV60 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 LSM12P1-201ENST00000411836 588 ntBASIC20.26■□□□□ 0.83
PTCD2Q8WV60 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTCD2Q8WV60 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 AC105020.6-201ENST00000621523 1217 ntBASIC20.25■□□□□ 0.83
PTCD2Q8WV60 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 AL391422.3-201ENST00000603791 2761 ntBASIC20.25■□□□□ 0.83
PTCD2Q8WV60 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCD2Q8WV60 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 AC112907.3-201ENST00000577781 2400 ntBASIC20.24■□□□□ 0.83
PTCD2Q8WV60 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 KRT18P68-201ENST00000392293 1000 ntBASIC20.24■□□□□ 0.83
PTCD2Q8WV60 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 RNA5SP413-201ENST00000516373 109 ntBASIC20.24■□□□□ 0.83
PTCD2Q8WV60 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTCD2Q8WV60 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 AC097658.1-201ENST00000475555 843 ntBASIC20.23■□□□□ 0.83
PTCD2Q8WV60 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCD2Q8WV60 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms