Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF2Q8TEC5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 AL121829.2-201ENST00000620908 328 ntBASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF2Q8TEC5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3RF2Q8TEC5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.79■□□□□ 0.92
SH3RF2Q8TEC5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 PTBP1P-201ENST00000554374 1601 ntBASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 AL049637.2-201ENST00000641778 930 ntBASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 AL135905.2-201ENST00000584934 1404 ntBASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.78■□□□□ 0.92
SH3RF2Q8TEC5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms