Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CFAP43Q8NDM7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC31.55■■■□□ 2.64
CFAP43Q8NDM7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 AC010947.1-201ENST00000623454 693 ntBASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 AC073195.1-201ENST00000607241 877 ntBASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CFAP43Q8NDM7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 AC023632.3-201ENST00000521633 145 ntBASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CFAP43Q8NDM7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
CFAP43Q8NDM7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CFAP43Q8NDM7 CYP2D8P-201ENST00000433633 1490 ntBASIC31.52■■■□□ 2.64
CFAP43Q8NDM7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CFAP43Q8NDM7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
CFAP43Q8NDM7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC31.52■■■□□ 2.64
CFAP43Q8NDM7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CFAP43Q8NDM7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC31.52■■■□□ 2.64
CFAP43Q8NDM7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
CFAP43Q8NDM7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC31.52■■■□□ 2.64
CFAP43Q8NDM7 LINC00565-201ENST00000562710 2331 ntBASIC31.52■■■□□ 2.64
CFAP43Q8NDM7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC31.51■■■□□ 2.64
CFAP43Q8NDM7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
CFAP43Q8NDM7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC31.51■■■□□ 2.64
CFAP43Q8NDM7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC31.51■■■□□ 2.64
CFAP43Q8NDM7 MIR1238-201ENST00000408483 83 ntBASIC31.51■■■□□ 2.64
CFAP43Q8NDM7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CFAP43Q8NDM7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
CFAP43Q8NDM7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC31.51■■■□□ 2.64
CFAP43Q8NDM7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC31.51■■■□□ 2.64
CFAP43Q8NDM7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
CFAP43Q8NDM7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
CFAP43Q8NDM7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
CFAP43Q8NDM7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
CFAP43Q8NDM7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CFAP43Q8NDM7 WWOX-216ENST00000569818 525 ntBASIC31.51■■■□□ 2.63
CFAP43Q8NDM7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CFAP43Q8NDM7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
CFAP43Q8NDM7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CFAP43Q8NDM7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CFAP43Q8NDM7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC31.5■■■□□ 2.63
CFAP43Q8NDM7 NAPSB-206ENST00000562112 1266 ntBASIC31.5■■■□□ 2.63
CFAP43Q8NDM7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC31.5■■■□□ 2.63
CFAP43Q8NDM7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC31.5■■■□□ 2.63
CFAP43Q8NDM7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CFAP43Q8NDM7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CFAP43Q8NDM7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC31.5■■■□□ 2.63
CFAP43Q8NDM7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CFAP43Q8NDM7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC31.49■■■□□ 2.63
CFAP43Q8NDM7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
CFAP43Q8NDM7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CFAP43Q8NDM7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CFAP43Q8NDM7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC31.49■■■□□ 2.63
CFAP43Q8NDM7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC31.49■■■□□ 2.63
CFAP43Q8NDM7 AC006011.2-201ENST00000621313 1158 ntBASIC31.49■■■□□ 2.63
CFAP43Q8NDM7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC31.49■■■□□ 2.63
CFAP43Q8NDM7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
CFAP43Q8NDM7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC31.49■■■□□ 2.63
CFAP43Q8NDM7 WWC2-AS2-201ENST00000578387 2183 ntBASIC31.49■■■□□ 2.63
CFAP43Q8NDM7 NBPF21P-201ENST00000425093 1451 ntBASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 KRT18P22-201ENST00000402024 1347 ntBASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 AL121906.2-201ENST00000621597 723 ntBASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CFAP43Q8NDM7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CFAP43Q8NDM7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms