Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RETREG2Q8NC44 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.68■■□□□ 1.22
RETREG2Q8NC44 AC211429.1-201ENST00000415277 523 ntBASIC22.68■■□□□ 1.22
RETREG2Q8NC44 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RETREG2Q8NC44 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
RETREG2Q8NC44 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.68■■□□□ 1.22
RETREG2Q8NC44 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RETREG2Q8NC44 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.68■■□□□ 1.22
RETREG2Q8NC44 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
RETREG2Q8NC44 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RETREG2Q8NC44 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RETREG2Q8NC44 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
RETREG2Q8NC44 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
RETREG2Q8NC44 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
RETREG2Q8NC44 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.67■■□□□ 1.22
RETREG2Q8NC44 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
RETREG2Q8NC44 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RETREG2Q8NC44 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RETREG2Q8NC44 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RETREG2Q8NC44 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RETREG2Q8NC44 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RETREG2Q8NC44 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RETREG2Q8NC44 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
RETREG2Q8NC44 C2orf69P4-201ENST00000565394 541 ntBASIC22.67■■□□□ 1.22
RETREG2Q8NC44 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RETREG2Q8NC44 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
RETREG2Q8NC44 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG2Q8NC44 AC073314.1-201ENST00000568729 2216 ntBASIC22.66■■□□□ 1.22
RETREG2Q8NC44 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
RETREG2Q8NC44 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG2Q8NC44 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG2Q8NC44 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG2Q8NC44 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG2Q8NC44 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.66■■□□□ 1.22
RETREG2Q8NC44 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
RETREG2Q8NC44 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RETREG2Q8NC44 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG2Q8NC44 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG2Q8NC44 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RETREG2Q8NC44 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 AC092667.1-201ENST00000434301 2586 ntBASIC22.65■■□□□ 1.22
RETREG2Q8NC44 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG2Q8NC44 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RETREG2Q8NC44 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RETREG2Q8NC44 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.64■■□□□ 1.22
RETREG2Q8NC44 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RETREG2Q8NC44 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RETREG2Q8NC44 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RETREG2Q8NC44 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.22
RETREG2Q8NC44 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
RETREG2Q8NC44 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.64■■□□□ 1.22
RETREG2Q8NC44 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RETREG2Q8NC44 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
RETREG2Q8NC44 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RETREG2Q8NC44 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.64■■□□□ 1.21
RETREG2Q8NC44 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.64■■□□□ 1.21
RETREG2Q8NC44 AL356652.1-201ENST00000615962 565 ntBASIC22.64■■□□□ 1.21
RETREG2Q8NC44 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
RETREG2Q8NC44 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RETREG2Q8NC44 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RETREG2Q8NC44 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RETREG2Q8NC44 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.64■■□□□ 1.21
RETREG2Q8NC44 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RETREG2Q8NC44 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 KRT17P2-201ENST00000300992 1314 ntBASIC22.63■■□□□ 1.21
RETREG2Q8NC44 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 AC012618.2-201ENST00000428058 849 ntBASIC22.63■■□□□ 1.21
RETREG2Q8NC44 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.63■■□□□ 1.21
RETREG2Q8NC44 LINC01023-201ENST00000606054 436 ntBASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms