Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC71LQ8N9Z2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC71LQ8N9Z2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.64■□□□□ 0.26
CCDC71LQ8N9Z2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 KRT8P36-201ENST00000489121 1440 ntBASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 AC079140.4-201ENST00000507448 529 ntBASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 AC138907.5-202ENST00000569484 235 ntBASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC71LQ8N9Z2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 AL691432.2-201ENST00000607222 2038 ntBASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 AC012414.1-201ENST00000556676 535 ntBASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71LQ8N9Z2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 FAM21FP-204ENST00000608637 956 ntBASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71LQ8N9Z2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC71LQ8N9Z2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms