Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CROCCP5-201ENST00000436658 830 ntBASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 MKRN4P-201ENST00000444706 1521 ntBASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TTC9CQ8N5M4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 LSM12P1-201ENST00000411836 588 ntBASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 KRT17P1-201ENST00000399211 1546 ntBASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.82■□□□□ 0.12
TTC9CQ8N5M4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 AC006970.2-201ENST00000450065 779 ntBASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 C2orf69P4-201ENST00000565394 541 ntBASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 AL121832.2-201ENST00000610979 668 ntBASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TTC9CQ8N5M4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 BX119927.1-201ENST00000636596 1552 ntBASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 KRT8P17-201ENST00000453110 1448 ntBASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TTC9CQ8N5M4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 PTBP1P-201ENST00000554374 1601 ntBASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 TCF3P1-201ENST00000423021 1937 ntBASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.79■□□□□ 0.12
TTC9CQ8N5M4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms