Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
VPS8Q8N3P4 KRASP1-201ENST00000407852 552 ntBASIC31.44■■■□□ 2.62
VPS8Q8N3P4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
VPS8Q8N3P4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC31.44■■■□□ 2.62
VPS8Q8N3P4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC31.44■■■□□ 2.62
VPS8Q8N3P4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC31.44■■■□□ 2.62
VPS8Q8N3P4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 AC116351.2-201ENST00000606540 1585 ntBASIC31.43■■■□□ 2.62
VPS8Q8N3P4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC31.43■■■□□ 2.62
VPS8Q8N3P4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
VPS8Q8N3P4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC31.41■■■□□ 2.62
VPS8Q8N3P4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC31.4■■■□□ 2.62
VPS8Q8N3P4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC31.4■■■□□ 2.62
VPS8Q8N3P4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
VPS8Q8N3P4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
VPS8Q8N3P4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC31.4■■■□□ 2.62
VPS8Q8N3P4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
VPS8Q8N3P4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
VPS8Q8N3P4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC31.4■■■□□ 2.62
VPS8Q8N3P4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
VPS8Q8N3P4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
VPS8Q8N3P4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
VPS8Q8N3P4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC31.39■■■□□ 2.62
VPS8Q8N3P4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
VPS8Q8N3P4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC31.39■■■□□ 2.62
VPS8Q8N3P4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
VPS8Q8N3P4 FAM197Y4-202ENST00000622692 608 ntBASIC31.39■■■□□ 2.62
VPS8Q8N3P4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
VPS8Q8N3P4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 KRT16P6-202ENST00000425692 1426 ntBASIC31.38■■■□□ 2.61
VPS8Q8N3P4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 UBE2SP1-201ENST00000450587 669 ntBASIC31.38■■■□□ 2.61
VPS8Q8N3P4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
VPS8Q8N3P4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
VPS8Q8N3P4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
VPS8Q8N3P4 PHGDH-210ENST00000641115 1638 ntBASIC31.37■■■□□ 2.61
VPS8Q8N3P4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC31.37■■■□□ 2.61
VPS8Q8N3P4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
VPS8Q8N3P4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
VPS8Q8N3P4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms