Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 C2orf69P3-201ENST00000565542 1120 ntBASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 CR392000.1-201ENST00000624770 1228 ntBASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL27A1Q8IZC6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19■□□□□ 0.63
COL27A1Q8IZC6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19■□□□□ 0.63
COL27A1Q8IZC6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19■□□□□ 0.63
COL27A1Q8IZC6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
COL27A1Q8IZC6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL27A1Q8IZC6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL27A1Q8IZC6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL27A1Q8IZC6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL27A1Q8IZC6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL27A1Q8IZC6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19■□□□□ 0.63
COL27A1Q8IZC6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COL27A1Q8IZC6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL27A1Q8IZC6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL27A1Q8IZC6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL27A1Q8IZC6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
COL27A1Q8IZC6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19■□□□□ 0.63
COL27A1Q8IZC6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 DUX4L26-201ENST00000489078 1255 ntBASIC18.99■□□□□ 0.63
COL27A1Q8IZC6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 NAPSB-206ENST00000562112 1266 ntBASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 DGCR10-201ENST00000609839 495 ntBASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 AC006011.2-201ENST00000621313 1158 ntBASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL27A1Q8IZC6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 B3GAT3P1-201ENST00000471720 806 ntBASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 AL031985.4-201ENST00000642138 673 ntBASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.97■□□□□ 0.63
COL27A1Q8IZC6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL27A1Q8IZC6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms