Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.08■□□□□ 0.96
SCUBE3Q8IX30 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.08■□□□□ 0.96
SCUBE3Q8IX30 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SCUBE3Q8IX30 PCDHAC2-203ENST00000615316 3011 ntBASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 AC005829.2-201ENST00000571422 1056 ntBASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCUBE3Q8IX30 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 AL031963.3-201ENST00000606441 850 ntBASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 AC073130.3-201ENST00000624389 2278 ntBASIC21.06■□□□□ 0.96
SCUBE3Q8IX30 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 HLA-G-202ENST00000376815 851 ntBASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 HLA-G-203ENST00000376818 1127 ntBASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 AC006557.6-201ENST00000623071 864 ntBASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCUBE3Q8IX30 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 AL390719.1-204ENST00000412397 1219 ntBASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.04■□□□□ 0.96
SCUBE3Q8IX30 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SCUBE3Q8IX30 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms