Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
DHX40Q8IX18 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.25■■□□□ 1.15
DHX40Q8IX18 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DHX40Q8IX18 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
DHX40Q8IX18 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
DHX40Q8IX18 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
DHX40Q8IX18 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DHX40Q8IX18 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
DHX40Q8IX18 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.25■■□□□ 1.15
DHX40Q8IX18 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.25■■□□□ 1.15
DHX40Q8IX18 SLC7A5P1-201ENST00000568957 537 ntBASIC22.25■■□□□ 1.15
DHX40Q8IX18 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DHX40Q8IX18 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DHX40Q8IX18 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DHX40Q8IX18 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.25■■□□□ 1.15
DHX40Q8IX18 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DHX40Q8IX18 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.25■■□□□ 1.15
DHX40Q8IX18 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC22.25■■□□□ 1.15
DHX40Q8IX18 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
DHX40Q8IX18 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.25■■□□□ 1.15
DHX40Q8IX18 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DHX40Q8IX18 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.24■■□□□ 1.15
DHX40Q8IX18 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.24■■□□□ 1.15
DHX40Q8IX18 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DHX40Q8IX18 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
DHX40Q8IX18 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DHX40Q8IX18 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DHX40Q8IX18 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.24■■□□□ 1.15
DHX40Q8IX18 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
DHX40Q8IX18 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DHX40Q8IX18 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.24■■□□□ 1.15
DHX40Q8IX18 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.24■■□□□ 1.15
DHX40Q8IX18 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
DHX40Q8IX18 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
DHX40Q8IX18 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
DHX40Q8IX18 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DHX40Q8IX18 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DHX40Q8IX18 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DHX40Q8IX18 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DHX40Q8IX18 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.23■■□□□ 1.15
DHX40Q8IX18 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DHX40Q8IX18 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
DHX40Q8IX18 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DHX40Q8IX18 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
DHX40Q8IX18 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
DHX40Q8IX18 AC123595.1-201ENST00000440769 1046 ntBASIC22.23■■□□□ 1.15
DHX40Q8IX18 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.23■■□□□ 1.15
DHX40Q8IX18 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.23■■□□□ 1.15
DHX40Q8IX18 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.23■■□□□ 1.15
DHX40Q8IX18 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
DHX40Q8IX18 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.23■■□□□ 1.15
DHX40Q8IX18 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
DHX40Q8IX18 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.23■■□□□ 1.15
DHX40Q8IX18 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.22■■□□□ 1.15
DHX40Q8IX18 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DHX40Q8IX18 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.22■■□□□ 1.15
DHX40Q8IX18 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.22■■□□□ 1.15
DHX40Q8IX18 AC009237.14-201ENST00000609975 1594 ntBASIC22.22■■□□□ 1.15
DHX40Q8IX18 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DHX40Q8IX18 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.22■■□□□ 1.15
DHX40Q8IX18 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.22■■□□□ 1.15
DHX40Q8IX18 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.22■■□□□ 1.15
DHX40Q8IX18 AC093503.3-201ENST00000624917 2352 ntBASIC22.22■■□□□ 1.15
DHX40Q8IX18 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
DHX40Q8IX18 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
DHX40Q8IX18 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
DHX40Q8IX18 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
DHX40Q8IX18 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DHX40Q8IX18 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.22■■□□□ 1.15
DHX40Q8IX18 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
DHX40Q8IX18 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
DHX40Q8IX18 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.21■■□□□ 1.15
DHX40Q8IX18 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
DHX40Q8IX18 PTBP1P-201ENST00000554374 1601 ntBASIC22.21■■□□□ 1.15
DHX40Q8IX18 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.21■■□□□ 1.15
DHX40Q8IX18 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
DHX40Q8IX18 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.21■■□□□ 1.15
DHX40Q8IX18 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.21■■□□□ 1.15
DHX40Q8IX18 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DHX40Q8IX18 TERF1P2-201ENST00000583350 1212 ntBASIC22.21■■□□□ 1.15
DHX40Q8IX18 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.21■■□□□ 1.15
DHX40Q8IX18 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.21■■□□□ 1.15
DHX40Q8IX18 AL356652.1-201ENST00000615962 565 ntBASIC22.21■■□□□ 1.15
DHX40Q8IX18 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
DHX40Q8IX18 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
DHX40Q8IX18 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DHX40Q8IX18 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DHX40Q8IX18 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DHX40Q8IX18 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DHX40Q8IX18 AC004854.2-201ENST00000608450 1441 ntBASIC22.21■■□□□ 1.15
DHX40Q8IX18 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.21■■□□□ 1.15
DHX40Q8IX18 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
DHX40Q8IX18 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DHX40Q8IX18 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
DHX40Q8IX18 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
DHX40Q8IX18 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
DHX40Q8IX18 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
DHX40Q8IX18 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
DHX40Q8IX18 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.2■■□□□ 1.15
DHX40Q8IX18 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms