Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRTM1Q86UE6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 CCDC92B-201ENST00000575506 885 ntBASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 AC131212.1-201ENST00000613771 668 ntBASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRRTM1Q86UE6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 AC008406.3-201ENST00000620001 1374 ntBASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRTM1Q86UE6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 AC105265.2-201ENST00000467189 838 ntBASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 SUDS3P1-201ENST00000505831 966 ntBASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 KRT18P20-201ENST00000548986 1279 ntBASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRTM1Q86UE6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRTM1Q86UE6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRTM1Q86UE6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRTM1Q86UE6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRTM1Q86UE6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
LRRTM1Q86UE6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRTM1Q86UE6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRTM1Q86UE6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRTM1Q86UE6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.33■□□□□ 0.37
LRRTM1Q86UE6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRTM1Q86UE6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
LRRTM1Q86UE6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRTM1Q86UE6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms