Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LDB1Q86U70 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LDB1Q86U70 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.99■□□□□ 0.79
LDB1Q86U70 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB1Q86U70 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB1Q86U70 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LDB1Q86U70 LSM12P1-201ENST00000411836 588 ntBASIC19.99■□□□□ 0.79
LDB1Q86U70 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.99■□□□□ 0.79
LDB1Q86U70 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB1Q86U70 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.99■□□□□ 0.79
LDB1Q86U70 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.99■□□□□ 0.79
LDB1Q86U70 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LDB1Q86U70 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB1Q86U70 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB1Q86U70 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.99■□□□□ 0.79
LDB1Q86U70 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB1Q86U70 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB1Q86U70 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB1Q86U70 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LDB1Q86U70 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LDB1Q86U70 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
LDB1Q86U70 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
LDB1Q86U70 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LDB1Q86U70 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDB1Q86U70 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.98■□□□□ 0.79
LDB1Q86U70 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LDB1Q86U70 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.98■□□□□ 0.79
LDB1Q86U70 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.98■□□□□ 0.79
LDB1Q86U70 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LDB1Q86U70 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDB1Q86U70 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LDB1Q86U70 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.98■□□□□ 0.79
LDB1Q86U70 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDB1Q86U70 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
LDB1Q86U70 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.98■□□□□ 0.79
LDB1Q86U70 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
LDB1Q86U70 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
LDB1Q86U70 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDB1Q86U70 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDB1Q86U70 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDB1Q86U70 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LDB1Q86U70 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.98■□□□□ 0.79
LDB1Q86U70 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LDB1Q86U70 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LDB1Q86U70 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LDB1Q86U70 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LDB1Q86U70 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LDB1Q86U70 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LDB1Q86U70 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.97■□□□□ 0.79
LDB1Q86U70 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LDB1Q86U70 C2orf69P4-201ENST00000565394 541 ntBASIC19.97■□□□□ 0.79
LDB1Q86U70 AL121832.2-201ENST00000610979 668 ntBASIC19.97■□□□□ 0.79
LDB1Q86U70 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.97■□□□□ 0.79
LDB1Q86U70 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LDB1Q86U70 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LDB1Q86U70 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LDB1Q86U70 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.97■□□□□ 0.79
LDB1Q86U70 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
LDB1Q86U70 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LDB1Q86U70 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LDB1Q86U70 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LDB1Q86U70 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LDB1Q86U70 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LDB1Q86U70 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LDB1Q86U70 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.96■□□□□ 0.79
LDB1Q86U70 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.96■□□□□ 0.79
LDB1Q86U70 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LDB1Q86U70 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.96■□□□□ 0.79
LDB1Q86U70 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.96■□□□□ 0.79
LDB1Q86U70 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.96■□□□□ 0.79
LDB1Q86U70 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LDB1Q86U70 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LDB1Q86U70 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
LDB1Q86U70 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LDB1Q86U70 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LDB1Q86U70 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LDB1Q86U70 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.95■□□□□ 0.78
LDB1Q86U70 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
LDB1Q86U70 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.95■□□□□ 0.78
LDB1Q86U70 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LDB1Q86U70 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LDB1Q86U70 MIPEPP3-201ENST00000412105 444 ntBASIC19.95■□□□□ 0.78
LDB1Q86U70 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.95■□□□□ 0.78
LDB1Q86U70 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.95■□□□□ 0.78
LDB1Q86U70 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.95■□□□□ 0.78
LDB1Q86U70 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.95■□□□□ 0.78
LDB1Q86U70 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LDB1Q86U70 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LDB1Q86U70 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LDB1Q86U70 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LDB1Q86U70 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LDB1Q86U70 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LDB1Q86U70 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LDB1Q86U70 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LDB1Q86U70 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LDB1Q86U70 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.94■□□□□ 0.78
LDB1Q86U70 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.94■□□□□ 0.78
LDB1Q86U70 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LDB1Q86U70 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LDB1Q86U70 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms