Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.18■□□□□ 0.34
RAI1Q7Z5J4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 KRT18P21-201ENST00000515767 1272 ntBASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 AC011484.1-201ENST00000377652 1995 ntBASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAI1Q7Z5J4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 NBPF21P-201ENST00000425093 1451 ntBASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 KRT8P9-201ENST00000558927 1449 ntBASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAI1Q7Z5J4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 AP003071.4-201ENST00000562276 1284 ntBASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 AF186192.3-201ENST00000583427 947 ntBASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 REXO1L10P-201ENST00000615707 1290 ntBASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAI1Q7Z5J4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RAI1Q7Z5J4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RAI1Q7Z5J4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
RAI1Q7Z5J4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 CD177P1-201ENST00000606252 935 ntBASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 AC026471.5-201ENST00000615068 467 ntBASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 PLK5-205ENST00000642079 1969 ntBASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 AC027702.1-201ENST00000563810 1770 ntBASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI1Q7Z5J4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI1Q7Z5J4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAI1Q7Z5J4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms