Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTCHD4Q6ZW05 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 TMEM179-206ENST00000616017 1645 ntBASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTCHD4Q6ZW05 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTCHD4Q6ZW05 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 TNXA-203ENST00000507684 2038 ntBASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 AC005332.7-201ENST00000614046 2005 ntBASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 AC004854.2-201ENST00000608450 1441 ntBASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 ZNRF2P3-201ENST00000424200 374 ntBASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 KRT18P14-201ENST00000534205 1250 ntBASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTCHD4Q6ZW05 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCHD4Q6ZW05 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms