Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC149Q6ZUS6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC149Q6ZUS6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
CCDC149Q6ZUS6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
CCDC149Q6ZUS6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC149Q6ZUS6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 KRT18P35-201ENST00000510488 1269 ntBASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 KRT8P20-201ENST00000423953 1409 ntBASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC149Q6ZUS6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 FAM197Y1-201ENST00000421178 764 ntBASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC149Q6ZUS6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC149Q6ZUS6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC149Q6ZUS6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CCDC149Q6ZUS6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC149Q6ZUS6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC149Q6ZUS6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC149Q6ZUS6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC149Q6ZUS6 AL031963.3-201ENST00000606441 850 ntBASIC21.08■□□□□ 0.97
CCDC149Q6ZUS6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC149Q6ZUS6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC149Q6ZUS6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC149Q6ZUS6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC149Q6ZUS6 EP400NL-214ENST00000641289 2402 ntBASIC21.08■□□□□ 0.96
CCDC149Q6ZUS6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC149Q6ZUS6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 ARMC10P1-201ENST00000313754 855 ntBASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 AC073195.1-201ENST00000607241 877 ntBASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 MIR6786-201ENST00000616843 113 ntBASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 PTBP1P-201ENST00000554374 1601 ntBASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC149Q6ZUS6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC149Q6ZUS6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC149Q6ZUS6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms