Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC30.09■■■□□ 2.41
CCDC141Q6ZP82 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC30.09■■■□□ 2.41
CCDC141Q6ZP82 CR392000.1-201ENST00000624770 1228 ntBASIC30.09■■■□□ 2.41
CCDC141Q6ZP82 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC30.09■■■□□ 2.41
CCDC141Q6ZP82 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC141Q6ZP82 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC141Q6ZP82 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC30.09■■■□□ 2.41
CCDC141Q6ZP82 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC141Q6ZP82 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 KRT18P57-201ENST00000443599 1254 ntBASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC141Q6ZP82 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CCDC141Q6ZP82 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC30.07■■■□□ 2.4
CCDC141Q6ZP82 AC005363.2-201ENST00000618631 242 ntBASIC30.07■■■□□ 2.4
CCDC141Q6ZP82 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
CCDC141Q6ZP82 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC30.07■■■□□ 2.4
CCDC141Q6ZP82 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC30.07■■■□□ 2.4
CCDC141Q6ZP82 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC30.07■■■□□ 2.4
CCDC141Q6ZP82 LINC01568-207ENST00000641790 1380 ntBASIC30.07■■■□□ 2.4
CCDC141Q6ZP82 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 NAPSB-206ENST00000562112 1266 ntBASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 KRT8P17-201ENST00000453110 1448 ntBASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 FEM1AP4-201ENST00000443167 1987 ntBASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 SLC25A3P1-201ENST00000443844 931 ntBASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 CBFB-203ENST00000561924 584 ntTSL 5 BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 AC073508.3-201ENST00000619697 1419 ntBASIC30.06■■■□□ 2.4
CCDC141Q6ZP82 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 AL445675.2-201ENST00000620291 557 ntBASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 ABBA01031674.1-201ENST00000635145 728 ntBASIC30.05■■■□□ 2.4
CCDC141Q6ZP82 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 BID-212ENST00000614949 1988 ntTSL 5 BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 CRAT-202ENST00000393384 973 ntTSL 2 BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CCDC141Q6ZP82 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCDC141Q6ZP82 AC116351.2-201ENST00000606540 1585 ntBASIC30.03■■■□□ 2.4
CCDC141Q6ZP82 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCDC141Q6ZP82 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCDC141Q6ZP82 PLK5-205ENST00000642079 1969 ntBASIC30.03■■■□□ 2.4
CCDC141Q6ZP82 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
CCDC141Q6ZP82 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC30.03■■■□□ 2.4
CCDC141Q6ZP82 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCDC141Q6ZP82 YBX1P10-201ENST00000444752 975 ntBASIC30.03■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms