Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF43Q68DV7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF43Q68DV7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RNF43Q68DV7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF43Q68DV7 AC027702.1-201ENST00000563810 1770 ntBASIC20.96■□□□□ 0.95
RNF43Q68DV7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 PGM5P4-201ENST00000421970 445 ntBASIC20.96■□□□□ 0.95
RNF43Q68DV7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF43Q68DV7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF43Q68DV7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF43Q68DV7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF43Q68DV7 AC060766.5-201ENST00000590539 871 ntBASIC20.96■□□□□ 0.95
RNF43Q68DV7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
RNF43Q68DV7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF43Q68DV7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF43Q68DV7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF43Q68DV7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF43Q68DV7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF43Q68DV7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF43Q68DV7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF43Q68DV7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF43Q68DV7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF43Q68DV7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF43Q68DV7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
RNF43Q68DV7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF43Q68DV7 C2orf69P4-201ENST00000565394 541 ntBASIC20.95■□□□□ 0.94
RNF43Q68DV7 AL356652.1-201ENST00000615962 565 ntBASIC20.95■□□□□ 0.94
RNF43Q68DV7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RNF43Q68DV7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF43Q68DV7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF43Q68DV7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF43Q68DV7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF43Q68DV7 AC073314.1-201ENST00000568729 2216 ntBASIC20.94■□□□□ 0.94
RNF43Q68DV7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF43Q68DV7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF43Q68DV7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF43Q68DV7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF43Q68DV7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF43Q68DV7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF43Q68DV7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.94■□□□□ 0.94
RNF43Q68DV7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF43Q68DV7 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.94■□□□□ 0.94
RNF43Q68DV7 AC026366.1-201ENST00000488803 879 ntBASIC20.94■□□□□ 0.94
RNF43Q68DV7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF43Q68DV7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF43Q68DV7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF43Q68DV7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF43Q68DV7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF43Q68DV7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF43Q68DV7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF43Q68DV7 AFG3L1P-217ENST00000557444 2447 ntBASIC20.94■□□□□ 0.94
RNF43Q68DV7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF43Q68DV7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF43Q68DV7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF43Q68DV7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF43Q68DV7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF43Q68DV7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF43Q68DV7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF43Q68DV7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF43Q68DV7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
RNF43Q68DV7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF43Q68DV7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RNF43Q68DV7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.93■□□□□ 0.94
RNF43Q68DV7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF43Q68DV7 AC073648.6-201ENST00000641589 218 ntBASIC20.93■□□□□ 0.94
RNF43Q68DV7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF43Q68DV7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF43Q68DV7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF43Q68DV7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF43Q68DV7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.93■□□□□ 0.94
RNF43Q68DV7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF43Q68DV7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF43Q68DV7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF43Q68DV7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
RNF43Q68DV7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF43Q68DV7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF43Q68DV7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF43Q68DV7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF43Q68DV7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF43Q68DV7 UBE2SP1-201ENST00000450587 669 ntBASIC20.92■□□□□ 0.94
RNF43Q68DV7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF43Q68DV7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF43Q68DV7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF43Q68DV7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF43Q68DV7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF43Q68DV7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF43Q68DV7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF43Q68DV7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms